Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.46■□□□□ 0.71
NCLP19338 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.46■□□□□ 0.71
NCLP19338 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NCLP19338 AL355877.3-201ENST00000622820 899 ntBASIC19.46■□□□□ 0.71
NCLP19338 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
NCLP19338 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.46■□□□□ 0.71
NCLP19338 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.46■□□□□ 0.71
NCLP19338 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCLP19338 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCLP19338 AC099063.4-201ENST00000641099 1602 ntBASIC19.46■□□□□ 0.71
NCLP19338 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCLP19338 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCLP19338 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCLP19338 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NCLP19338 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCLP19338 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCLP19338 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.46■□□□□ 0.71
NCLP19338 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.45■□□□□ 0.7
NCLP19338 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NCLP19338 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NCLP19338 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NCLP19338 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NCLP19338 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.45■□□□□ 0.7
NCLP19338 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NCLP19338 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
NCLP19338 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NCLP19338 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
NCLP19338 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NCLP19338 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.45■□□□□ 0.7
NCLP19338 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NCLP19338 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NCLP19338 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NCLP19338 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NCLP19338 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NCLP19338 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NCLP19338 AP000347.1-202ENST00000435868 847 ntBASIC19.45■□□□□ 0.7
NCLP19338 FAM197Y8-203ENST00000450145 560 ntBASIC19.45■□□□□ 0.7
NCLP19338 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.45■□□□□ 0.7
NCLP19338 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.45■□□□□ 0.7
NCLP19338 AP001269.4-201ENST00000609611 512 ntBASIC19.45■□□□□ 0.7
NCLP19338 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.45■□□□□ 0.7
NCLP19338 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NCLP19338 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NCLP19338 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NCLP19338 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC19.45■□□□□ 0.7
NCLP19338 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NCLP19338 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
NCLP19338 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NCLP19338 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCLP19338 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCLP19338 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCLP19338 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCLP19338 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCLP19338 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCLP19338 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC19.44■□□□□ 0.7
NCLP19338 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC19.44■□□□□ 0.7
NCLP19338 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.44■□□□□ 0.7
NCLP19338 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.44■□□□□ 0.7
NCLP19338 AC006277.1-201ENST00000624348 1610 ntBASIC19.44■□□□□ 0.7
NCLP19338 OR2I1P-210ENST00000642037 4691 ntBASIC19.44■□□□□ 0.7
NCLP19338 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NCLP19338 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCLP19338 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCLP19338 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NCLP19338 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NCLP19338 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCLP19338 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
NCLP19338 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NCLP19338 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.44■□□□□ 0.7
NCLP19338 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCLP19338 FGFR3P6-201ENST00000457012 610 ntBASIC19.44■□□□□ 0.7
NCLP19338 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
NCLP19338 RNA5SP419-201ENST00000515908 135 ntBASIC19.44■□□□□ 0.7
NCLP19338 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.44■□□□□ 0.7
NCLP19338 LINC02228-204ENST00000642115 2962 ntBASIC19.44■□□□□ 0.7
NCLP19338 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NCLP19338 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
NCLP19338 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NCLP19338 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCLP19338 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC19.44■□□□□ 0.7
NCLP19338 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.44■□□□□ 0.7
NCLP19338 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.44■□□□□ 0.7
NCLP19338 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC19.44■□□□□ 0.7
NCLP19338 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC19.44■□□□□ 0.7
NCLP19338 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.43■□□□□ 0.7
NCLP19338 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCLP19338 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCLP19338 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCLP19338 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCLP19338 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCLP19338 SIGLEC16-201ENST00000599858 1437 ntBASIC19.43■□□□□ 0.7
NCLP19338 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCLP19338 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NCLP19338 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCLP19338 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
NCLP19338 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCLP19338 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.43■□□□□ 0.7
NCLP19338 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCLP19338 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.43■□□□□ 0.7
NCLP19338 ABCD1P5-201ENST00000445663 754 ntBASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms