Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.48■□□□□ 0.39
CD58P19256 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD58P19256 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CD58P19256 AL596087.1-201ENST00000400979 1969 ntBASIC17.48■□□□□ 0.39
CD58P19256 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD58P19256 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CD58P19256 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.47■□□□□ 0.39
CD58P19256 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CD58P19256 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
CD58P19256 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD58P19256 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.47■□□□□ 0.39
CD58P19256 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CD58P19256 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD58P19256 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.47■□□□□ 0.39
CD58P19256 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.47■□□□□ 0.39
CD58P19256 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.47■□□□□ 0.39
CD58P19256 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD58P19256 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CD58P19256 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD58P19256 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD58P19256 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD58P19256 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD58P19256 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.47■□□□□ 0.39
CD58P19256 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD58P19256 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.47■□□□□ 0.39
CD58P19256 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.47■□□□□ 0.39
CD58P19256 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.47■□□□□ 0.39
CD58P19256 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.47■□□□□ 0.39
CD58P19256 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.47■□□□□ 0.39
CD58P19256 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD58P19256 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.47■□□□□ 0.39
CD58P19256 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.47■□□□□ 0.39
CD58P19256 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.47■□□□□ 0.39
CD58P19256 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
CD58P19256 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.47■□□□□ 0.39
CD58P19256 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.47■□□□□ 0.39
CD58P19256 AC027612.4-201ENST00000605371 583 ntBASIC17.47■□□□□ 0.39
CD58P19256 AC079781.4-201ENST00000641908 219 ntBASIC17.47■□□□□ 0.39
CD58P19256 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD58P19256 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.47■□□□□ 0.39
CD58P19256 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD58P19256 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.47■□□□□ 0.39
CD58P19256 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD58P19256 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD58P19256 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CD58P19256 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD58P19256 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD58P19256 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD58P19256 CICP6-201ENST00000457191 2729 ntBASIC17.47■□□□□ 0.39
CD58P19256 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD58P19256 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.47■□□□□ 0.39
CD58P19256 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.47■□□□□ 0.39
CD58P19256 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CD58P19256 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD58P19256 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.47■□□□□ 0.39
CD58P19256 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD58P19256 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD58P19256 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CD58P19256 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD58P19256 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD58P19256 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD58P19256 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD58P19256 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD58P19256 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.46■□□□□ 0.39
CD58P19256 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD58P19256 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
CD58P19256 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.46■□□□□ 0.39
CD58P19256 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.46■□□□□ 0.39
CD58P19256 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD58P19256 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.46■□□□□ 0.39
CD58P19256 AC006538.3-201ENST00000612495 578 ntBASIC17.46■□□□□ 0.39
CD58P19256 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.46■□□□□ 0.39
CD58P19256 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CD58P19256 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD58P19256 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CD58P19256 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.46■□□□□ 0.39
CD58P19256 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.46■□□□□ 0.39
CD58P19256 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CD58P19256 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.46■□□□□ 0.39
CD58P19256 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD58P19256 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
CD58P19256 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
CD58P19256 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
CD58P19256 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.46■□□□□ 0.38
CD58P19256 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CD58P19256 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.46■□□□□ 0.38
CD58P19256 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CD58P19256 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CD58P19256 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
CD58P19256 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CD58P19256 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD58P19256 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CD58P19256 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CD58P19256 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CD58P19256 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.45■□□□□ 0.38
CD58P19256 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.45■□□□□ 0.38
CD58P19256 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CD58P19256 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.45■□□□□ 0.38
CD58P19256 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CD58P19256 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms