Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.16■□□□□ 0.34
PTPN1P18031 AC241585.1-201ENST00000433527 519 ntBASIC17.16■□□□□ 0.34
PTPN1P18031 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.16■□□□□ 0.34
PTPN1P18031 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.16■□□□□ 0.34
PTPN1P18031 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.16■□□□□ 0.34
PTPN1P18031 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PTPN1P18031 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.16■□□□□ 0.34
PTPN1P18031 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.16■□□□□ 0.34
PTPN1P18031 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
PTPN1P18031 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN1P18031 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
PTPN1P18031 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN1P18031 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.16■□□□□ 0.34
PTPN1P18031 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.16■□□□□ 0.34
PTPN1P18031 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PTPN1P18031 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN1P18031 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.16■□□□□ 0.34
PTPN1P18031 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.16■□□□□ 0.34
PTPN1P18031 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
PTPN1P18031 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.16■□□□□ 0.34
PTPN1P18031 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN1P18031 AL136982.4-201ENST00000437689 1740 ntBASIC17.16■□□□□ 0.34
PTPN1P18031 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN1P18031 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.16■□□□□ 0.34
PTPN1P18031 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN1P18031 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PTPN1P18031 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PTPN1P18031 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PTPN1P18031 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN1P18031 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN1P18031 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN1P18031 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN1P18031 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN1P18031 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN1P18031 AC100757.3-201ENST00000622361 1406 ntBASIC17.15■□□□□ 0.34
PTPN1P18031 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PTPN1P18031 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN1P18031 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN1P18031 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.15■□□□□ 0.34
PTPN1P18031 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN1P18031 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.15■□□□□ 0.34
PTPN1P18031 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN1P18031 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PTPN1P18031 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PTPN1P18031 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.15■□□□□ 0.34
PTPN1P18031 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.15■□□□□ 0.34
PTPN1P18031 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.15■□□□□ 0.34
PTPN1P18031 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.15■□□□□ 0.34
PTPN1P18031 SPCS2P1-201ENST00000561636 679 ntBASIC17.15■□□□□ 0.34
PTPN1P18031 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.15■□□□□ 0.34
PTPN1P18031 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.15■□□□□ 0.34
PTPN1P18031 AC011467.4-201ENST00000594891 528 ntBASIC17.15■□□□□ 0.34
PTPN1P18031 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN1P18031 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.15■□□□□ 0.34
PTPN1P18031 TEX28P1-201ENST00000613479 1221 ntBASIC17.15■□□□□ 0.34
PTPN1P18031 TEX28P2-201ENST00000617764 1221 ntBASIC17.15■□□□□ 0.34
PTPN1P18031 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.15■□□□□ 0.34
PTPN1P18031 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.15■□□□□ 0.34
PTPN1P18031 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PTPN1P18031 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN1P18031 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN1P18031 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN1P18031 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PTPN1P18031 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN1P18031 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN1P18031 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.15■□□□□ 0.34
PTPN1P18031 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.15■□□□□ 0.34
PTPN1P18031 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
PTPN1P18031 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN1P18031 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN1P18031 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PTPN1P18031 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.15■□□□□ 0.34
PTPN1P18031 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.15■□□□□ 0.34
PTPN1P18031 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.15■□□□□ 0.34
PTPN1P18031 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PTPN1P18031 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.14■□□□□ 0.34
PTPN1P18031 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.14■□□□□ 0.33
PTPN1P18031 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.14■□□□□ 0.33
PTPN1P18031 AL691432.1-201ENST00000596308 1422 ntBASIC17.14■□□□□ 0.33
PTPN1P18031 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN1P18031 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.14■□□□□ 0.33
PTPN1P18031 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.14■□□□□ 0.33
PTPN1P18031 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN1P18031 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN1P18031 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN1P18031 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.14■□□□□ 0.33
PTPN1P18031 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN1P18031 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN1P18031 SPDYE17-201ENST00000412399 783 ntBASIC17.14■□□□□ 0.33
PTPN1P18031 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.14■□□□□ 0.33
PTPN1P18031 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.14■□□□□ 0.33
PTPN1P18031 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN1P18031 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.14■□□□□ 0.33
PTPN1P18031 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.14■□□□□ 0.33
PTPN1P18031 AL096865.1-201ENST00000606796 927 ntBASIC17.14■□□□□ 0.33
PTPN1P18031 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.14■□□□□ 0.33
PTPN1P18031 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN1P18031 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PTPN1P18031 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.14■□□□□ 0.33
PTPN1P18031 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms