Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RB1P06400 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RB1P06400 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RB1P06400 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RB1P06400 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.04■□□□□ 0.32
RB1P06400 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RB1P06400 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
RB1P06400 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RB1P06400 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.04■□□□□ 0.32
RB1P06400 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.04■□□□□ 0.32
RB1P06400 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RB1P06400 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RB1P06400 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RB1P06400 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RB1P06400 TOMM22P5-201ENST00000416399 439 ntBASIC17.04■□□□□ 0.32
RB1P06400 SOCS2P1-201ENST00000417727 557 ntBASIC17.04■□□□□ 0.32
RB1P06400 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.04■□□□□ 0.32
RB1P06400 AC007551.1-201ENST00000457394 519 ntBASIC17.04■□□□□ 0.32
RB1P06400 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RB1P06400 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.04■□□□□ 0.32
RB1P06400 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RB1P06400 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RB1P06400 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.04■□□□□ 0.32
RB1P06400 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RB1P06400 AC243562.2-201ENST00000561247 970 ntBASIC17.04■□□□□ 0.32
RB1P06400 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.04■□□□□ 0.32
RB1P06400 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RB1P06400 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RB1P06400 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RB1P06400 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.04■□□□□ 0.32
RB1P06400 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RB1P06400 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RB1P06400 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RB1P06400 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RB1P06400 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RB1P06400 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RB1P06400 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RB1P06400 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RB1P06400 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
RB1P06400 KRT8P37-201ENST00000451609 1420 ntBASIC17.04■□□□□ 0.32
RB1P06400 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.04■□□□□ 0.32
RB1P06400 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RB1P06400 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RB1P06400 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RB1P06400 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
RB1P06400 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RB1P06400 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RB1P06400 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RB1P06400 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RB1P06400 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RB1P06400 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RB1P06400 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.03■□□□□ 0.32
RB1P06400 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.03■□□□□ 0.32
RB1P06400 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.03■□□□□ 0.32
RB1P06400 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RB1P06400 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RB1P06400 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RB1P06400 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.03■□□□□ 0.32
RB1P06400 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.03■□□□□ 0.32
RB1P06400 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RB1P06400 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RB1P06400 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.03■□□□□ 0.32
RB1P06400 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.03■□□□□ 0.32
RB1P06400 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.03■□□□□ 0.32
RB1P06400 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RB1P06400 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.03■□□□□ 0.32
RB1P06400 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.03■□□□□ 0.32
RB1P06400 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RB1P06400 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.03■□□□□ 0.32
RB1P06400 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
RB1P06400 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.03■□□□□ 0.32
RB1P06400 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RB1P06400 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RB1P06400 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RB1P06400 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RB1P06400 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RB1P06400 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.03■□□□□ 0.32
RB1P06400 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.03■□□□□ 0.32
RB1P06400 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RB1P06400 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RB1P06400 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.03■□□□□ 0.32
RB1P06400 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RB1P06400 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.02■□□□□ 0.32
RB1P06400 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RB1P06400 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RB1P06400 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RB1P06400 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RB1P06400 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RB1P06400 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.02■□□□□ 0.32
RB1P06400 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RB1P06400 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RB1P06400 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RB1P06400 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RB1P06400 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RB1P06400 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.02■□□□□ 0.32
RB1P06400 AZGP1P1-201ENST00000411909 902 ntBASIC17.02■□□□□ 0.32
RB1P06400 AC245100.5-201ENST00000452108 331 ntBASIC17.02■□□□□ 0.32
RB1P06400 AC108725.1-201ENST00000495472 409 ntBASIC17.02■□□□□ 0.32
RB1P06400 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.02■□□□□ 0.32
RB1P06400 AC124283.3-201ENST00000570869 594 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms