Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SIX3O95343 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.91■□□□□ 0.14
SIX3O95343 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX3O95343 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.91■□□□□ 0.14
SIX3O95343 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX3O95343 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.91■□□□□ 0.14
SIX3O95343 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX3O95343 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.91■□□□□ 0.14
SIX3O95343 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.91■□□□□ 0.14
SIX3O95343 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.91■□□□□ 0.14
SIX3O95343 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.91■□□□□ 0.14
SIX3O95343 AC145285.3-201ENST00000564603 959 ntBASIC15.91■□□□□ 0.14
SIX3O95343 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.91■□□□□ 0.14
SIX3O95343 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.91■□□□□ 0.14
SIX3O95343 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.91■□□□□ 0.14
SIX3O95343 AL121894.2-201ENST00000602977 491 ntBASIC15.91■□□□□ 0.14
SIX3O95343 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX3O95343 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.91■□□□□ 0.14
SIX3O95343 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SIX3O95343 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.91■□□□□ 0.14
SIX3O95343 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.91■□□□□ 0.14
SIX3O95343 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
SIX3O95343 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.91■□□□□ 0.14
SIX3O95343 AC073347.1-201ENST00000421633 2643 ntBASIC15.91■□□□□ 0.14
SIX3O95343 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.91■□□□□ 0.14
SIX3O95343 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX3O95343 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX3O95343 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX3O95343 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX3O95343 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX3O95343 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX3O95343 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SIX3O95343 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
SIX3O95343 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX3O95343 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.9■□□□□ 0.14
SIX3O95343 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SIX3O95343 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX3O95343 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX3O95343 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.9■□□□□ 0.14
SIX3O95343 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.9■□□□□ 0.14
SIX3O95343 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
SIX3O95343 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SIX3O95343 AP002414.2-201ENST00000591780 3365 ntBASIC15.9■□□□□ 0.14
SIX3O95343 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SIX3O95343 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX3O95343 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SIX3O95343 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
SIX3O95343 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.9■□□□□ 0.14
SIX3O95343 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX3O95343 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX3O95343 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SIX3O95343 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SIX3O95343 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SIX3O95343 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.9■□□□□ 0.14
SIX3O95343 KRT19P2-202ENST00000557173 1012 ntBASIC15.9■□□□□ 0.14
SIX3O95343 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.9■□□□□ 0.14
SIX3O95343 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.9■□□□□ 0.14
SIX3O95343 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.9■□□□□ 0.14
SIX3O95343 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
SIX3O95343 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.9■□□□□ 0.14
SIX3O95343 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX3O95343 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.9■□□□□ 0.14
SIX3O95343 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
SIX3O95343 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
SIX3O95343 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SIX3O95343 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX3O95343 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SIX3O95343 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX3O95343 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SIX3O95343 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SIX3O95343 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX3O95343 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SIX3O95343 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX3O95343 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SIX3O95343 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
SIX3O95343 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIX3O95343 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIX3O95343 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SIX3O95343 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIX3O95343 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SIX3O95343 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIX3O95343 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIX3O95343 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.89■□□□□ 0.13
SIX3O95343 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIX3O95343 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIX3O95343 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SIX3O95343 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
SIX3O95343 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIX3O95343 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.89■□□□□ 0.13
SIX3O95343 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SIX3O95343 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.89■□□□□ 0.13
SIX3O95343 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIX3O95343 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SIX3O95343 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIX3O95343 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SIX3O95343 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.89■□□□□ 0.13
SIX3O95343 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.89■□□□□ 0.13
SIX3O95343 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.89■□□□□ 0.13
SIX3O95343 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIX3O95343 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms