Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXN1O15353 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXN1O15353 AC018695.7-201ENST00000624587 2492 ntBASIC19.34■□□□□ 0.69
FOXN1O15353 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXN1O15353 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FOXN1O15353 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
FOXN1O15353 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXN1O15353 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.34■□□□□ 0.69
FOXN1O15353 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXN1O15353 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FOXN1O15353 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXN1O15353 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FOXN1O15353 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXN1O15353 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC19.34■□□□□ 0.69
FOXN1O15353 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC19.34■□□□□ 0.69
FOXN1O15353 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.34■□□□□ 0.69
FOXN1O15353 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC19.34■□□□□ 0.69
FOXN1O15353 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC19.34■□□□□ 0.69
FOXN1O15353 MIR4706-201ENST00000582134 82 ntBASIC19.34■□□□□ 0.69
FOXN1O15353 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC19.34■□□□□ 0.69
FOXN1O15353 AL031055.1-201ENST00000606362 631 ntBASIC19.34■□□□□ 0.69
FOXN1O15353 AL118558.3-201ENST00000607414 1079 ntBASIC19.34■□□□□ 0.69
FOXN1O15353 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC19.34■□□□□ 0.69
FOXN1O15353 AL033527.5-201ENST00000641382 801 ntBASIC19.34■□□□□ 0.69
FOXN1O15353 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXN1O15353 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXN1O15353 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXN1O15353 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXN1O15353 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXN1O15353 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.34■□□□□ 0.69
FOXN1O15353 HCG11-201ENST00000411553 5696 ntBASIC19.34■□□□□ 0.69
FOXN1O15353 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FOXN1O15353 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
FOXN1O15353 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FOXN1O15353 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FOXN1O15353 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.33■□□□□ 0.69
FOXN1O15353 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
FOXN1O15353 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FOXN1O15353 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
FOXN1O15353 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
FOXN1O15353 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
FOXN1O15353 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.33■□□□□ 0.69
FOXN1O15353 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.33■□□□□ 0.69
FOXN1O15353 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FOXN1O15353 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FOXN1O15353 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FOXN1O15353 HINT2P1-201ENST00000419438 481 ntBASIC19.33■□□□□ 0.68
FOXN1O15353 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC19.33■□□□□ 0.68
FOXN1O15353 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC19.33■□□□□ 0.68
FOXN1O15353 AC023310.3-201ENST00000557027 670 ntBASIC19.33■□□□□ 0.68
FOXN1O15353 AC100756.1-201ENST00000562736 682 ntBASIC19.33■□□□□ 0.68
FOXN1O15353 AC138749.3-201ENST00000567691 622 ntBASIC19.33■□□□□ 0.68
FOXN1O15353 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC19.33■□□□□ 0.68
FOXN1O15353 AC026740.1-201ENST00000607068 791 ntBASIC19.33■□□□□ 0.68
FOXN1O15353 AC116165.1-201ENST00000611806 668 ntBASIC19.33■□□□□ 0.68
FOXN1O15353 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC19.33■□□□□ 0.68
FOXN1O15353 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.33■□□□□ 0.68
FOXN1O15353 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.33■□□□□ 0.68
FOXN1O15353 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FOXN1O15353 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
FOXN1O15353 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
FOXN1O15353 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
FOXN1O15353 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FOXN1O15353 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC19.33■□□□□ 0.68
FOXN1O15353 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FOXN1O15353 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.33■□□□□ 0.68
FOXN1O15353 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.33■□□□□ 0.68
FOXN1O15353 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.32■□□□□ 0.68
FOXN1O15353 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.32■□□□□ 0.68
FOXN1O15353 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN1O15353 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
FOXN1O15353 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
FOXN1O15353 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN1O15353 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
FOXN1O15353 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN1O15353 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN1O15353 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN1O15353 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN1O15353 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
FOXN1O15353 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN1O15353 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
FOXN1O15353 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
FOXN1O15353 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN1O15353 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN1O15353 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN1O15353 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
FOXN1O15353 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN1O15353 RNU1-129P-201ENST00000384064 167 ntBASIC19.32■□□□□ 0.68
FOXN1O15353 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
FOXN1O15353 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
FOXN1O15353 RN7SL618P-201ENST00000477850 296 ntBASIC19.32■□□□□ 0.68
FOXN1O15353 AC124947.2-201ENST00000547118 1133 ntBASIC19.32■□□□□ 0.68
FOXN1O15353 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.32■□□□□ 0.68
FOXN1O15353 U1.21-201ENST00000580816 167 ntBASIC19.32■□□□□ 0.68
FOXN1O15353 SRD5A3P1-201ENST00000603021 949 ntBASIC19.32■□□□□ 0.68
FOXN1O15353 AL365330.1-201ENST00000607459 531 ntBASIC19.32■□□□□ 0.68
FOXN1O15353 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN1O15353 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.32■□□□□ 0.68
FOXN1O15353 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
FOXN1O15353 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms