Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB1Q9Y5F3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 AC063926.2-201ENST00000623766 1308 ntBASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 AL390754.1-201ENST00000619088 582 ntBASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 AL592424.1-201ENST00000563624 1536 ntBASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHB1Q9Y5F3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 AL596087.1-201ENST00000400979 1969 ntBASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 AC093724.1-201ENST00000448659 1027 ntBASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 IGHV3-42-201ENST00000520410 361 ntBASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 AC005225.4-201ENST00000557330 545 ntBASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB1Q9Y5F3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PCDHB1Q9Y5F3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB1Q9Y5F3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PCDHB1Q9Y5F3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB1Q9Y5F3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB1Q9Y5F3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB1Q9Y5F3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.27■□□□□ 0.19
PCDHB1Q9Y5F3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB1Q9Y5F3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.27■□□□□ 0.19
PCDHB1Q9Y5F3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB1Q9Y5F3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PCDHB1Q9Y5F3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB1Q9Y5F3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
PCDHB1Q9Y5F3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB1Q9Y5F3 PCDH8P1-201ENST00000428983 2773 ntBASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 AC008677.1-201ENST00000519230 1561 ntBASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 AKAP8P1-201ENST00000434743 1349 ntBASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 UXT-AS1-201ENST00000590504 1525 ntBASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB1Q9Y5F3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms