Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 AC126755.1-201ENST00000525846 6405 ntBASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 TMBIM7P-203ENST00000641617 1718 ntBASIC11.38□□□□□ -0.59
UBE2D4Q9Y2X8 AP002414.2-201ENST00000591780 3365 ntBASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 AC129492.6-201ENST00000611383 1305 ntBASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 AC008677.1-201ENST00000519230 1561 ntBASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 AP003680.1-201ENST00000598970 3660 ntBASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 EMD-201ENST00000369835 966 ntTSL 3 BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 RNF151-202ENST00000569210 853 ntTSL 2 BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 SDCCAG3P1-201ENST00000589292 1150 ntBASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 NPAP1P7-201ENST00000613027 823 ntBASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
UBE2D4Q9Y2X8 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC11.36□□□□□ -0.59
UBE2D4Q9Y2X8 AC006486.2-201ENST00000624246 2199 ntBASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms