Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HMG20BQ9P0W2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
HMG20BQ9P0W2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.74■□□□□ 0.75
HMG20BQ9P0W2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.74■□□□□ 0.75
HMG20BQ9P0W2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HMG20BQ9P0W2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.74■□□□□ 0.75
HMG20BQ9P0W2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HMG20BQ9P0W2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.74■□□□□ 0.75
HMG20BQ9P0W2 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
HMG20BQ9P0W2 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HMG20BQ9P0W2 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMG20BQ9P0W2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.74■□□□□ 0.75
HMG20BQ9P0W2 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.74■□□□□ 0.75
HMG20BQ9P0W2 AL512638.1-201ENST00000457493 794 ntBASIC19.74■□□□□ 0.75
HMG20BQ9P0W2 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
HMG20BQ9P0W2 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.74■□□□□ 0.75
HMG20BQ9P0W2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMG20BQ9P0W2 AC026691.1-201ENST00000602502 2017 ntBASIC19.74■□□□□ 0.75
HMG20BQ9P0W2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMG20BQ9P0W2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HMG20BQ9P0W2 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.74■□□□□ 0.75
HMG20BQ9P0W2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.74■□□□□ 0.75
HMG20BQ9P0W2 TNRC18P3-201ENST00000441896 2691 ntBASIC19.74■□□□□ 0.75
HMG20BQ9P0W2 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMG20BQ9P0W2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMG20BQ9P0W2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMG20BQ9P0W2 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HMG20BQ9P0W2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMG20BQ9P0W2 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.74■□□□□ 0.75
HMG20BQ9P0W2 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 AC236430.1-201ENST00000402231 743 ntBASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 MIR4321-201ENST00000592276 80 ntBASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 AL844908.2-201ENST00000609461 460 ntBASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 AL513523.2-202ENST00000427283 2040 ntBASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
HMG20BQ9P0W2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
HMG20BQ9P0W2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HMG20BQ9P0W2 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HMG20BQ9P0W2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.72■□□□□ 0.75
HMG20BQ9P0W2 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.72■□□□□ 0.75
HMG20BQ9P0W2 AL592424.1-201ENST00000563624 1536 ntBASIC19.72■□□□□ 0.75
HMG20BQ9P0W2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
HMG20BQ9P0W2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HMG20BQ9P0W2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HMG20BQ9P0W2 AL391005.1-201ENST00000623953 2435 ntBASIC19.72■□□□□ 0.75
HMG20BQ9P0W2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.72■□□□□ 0.75
HMG20BQ9P0W2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMG20BQ9P0W2 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMG20BQ9P0W2 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMG20BQ9P0W2 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HMG20BQ9P0W2 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HMG20BQ9P0W2 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HMG20BQ9P0W2 AC002472.2-201ENST00000442739 958 ntBASIC19.72■□□□□ 0.75
HMG20BQ9P0W2 AC009477.1-201ENST00000452936 217 ntBASIC19.72■□□□□ 0.75
HMG20BQ9P0W2 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
HMG20BQ9P0W2 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.72■□□□□ 0.75
HMG20BQ9P0W2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
HMG20BQ9P0W2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMG20BQ9P0W2 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HMG20BQ9P0W2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
HMG20BQ9P0W2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HMG20BQ9P0W2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.72■□□□□ 0.75
HMG20BQ9P0W2 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
HMG20BQ9P0W2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms