Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 AC009336.1-201ENST00000608941 1553 ntBASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 SSR4P1-203ENST00000599569 2260 ntBASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 FAM8A6P-201ENST00000407496 1135 ntBASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 AC026396.1-201ENST00000419388 421 ntBASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 AL845331.1-201ENST00000424978 1190 ntBASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 AC007967.3-201ENST00000434308 558 ntBASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 POU5F1P6-201ENST00000466990 990 ntBASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 AC107956.1-201ENST00000494359 873 ntBASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 ADM-205ENST00000528544 586 ntTSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 COA4-204ENST00000541455 1038 ntTSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 AC104771.1-201ENST00000603335 964 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms