Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 CLEC4GP1-201ENST00000596555 870 ntBASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
HDHD3Q9BSH5 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HDHD3Q9BSH5 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.77□□□□□ -0.2
HDHD3Q9BSH5 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.77□□□□□ -0.2
HDHD3Q9BSH5 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
HDHD3Q9BSH5 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
HDHD3Q9BSH5 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HDHD3Q9BSH5 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
HDHD3Q9BSH5 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
HDHD3Q9BSH5 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HDHD3Q9BSH5 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HDHD3Q9BSH5 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 AC108073.2-201ENST00000464002 357 ntBASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 AC073648.2-201ENST00000510116 352 ntBASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 AC012640.2-201ENST00000561606 901 ntBASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 LINC01711-201ENST00000598340 967 ntBASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 AL356488.2-201ENST00000602755 427 ntBASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 IFNL4P1-201ENST00000607083 540 ntBASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 ACTL9-202ENST00000612068 1252 ntBASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 FLJ16779-201ENST00000612722 7638 ntBASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 MIR1199-201ENST00000621445 119 ntBASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 AC022532.1-201ENST00000624563 1728 ntBASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.77□□□□□ -0.21
HDHD3Q9BSH5 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HDHD3Q9BSH5 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms