Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.5■□□□□ 0.23
NOTCH4Q99466 SLED1-202ENST00000512051 380 ntBASIC16.5■□□□□ 0.23
NOTCH4Q99466 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.5■□□□□ 0.23
NOTCH4Q99466 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.5■□□□□ 0.23
NOTCH4Q99466 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.5■□□□□ 0.23
NOTCH4Q99466 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NOTCH4Q99466 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.49■□□□□ 0.23
NOTCH4Q99466 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.49■□□□□ 0.23
NOTCH4Q99466 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NOTCH4Q99466 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NOTCH4Q99466 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NOTCH4Q99466 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.49■□□□□ 0.23
NOTCH4Q99466 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NOTCH4Q99466 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NOTCH4Q99466 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NOTCH4Q99466 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NOTCH4Q99466 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NOTCH4Q99466 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NOTCH4Q99466 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NOTCH4Q99466 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NOTCH4Q99466 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
NOTCH4Q99466 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.49■□□□□ 0.23
NOTCH4Q99466 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.49■□□□□ 0.23
NOTCH4Q99466 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.49■□□□□ 0.23
NOTCH4Q99466 ACTG1P3-201ENST00000431775 1114 ntBASIC16.49■□□□□ 0.23
NOTCH4Q99466 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NOTCH4Q99466 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NOTCH4Q99466 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.49■□□□□ 0.23
NOTCH4Q99466 ZNF767P-206ENST00000513792 565 ntBASIC16.49■□□□□ 0.23
NOTCH4Q99466 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.49■□□□□ 0.23
NOTCH4Q99466 AC097359.3-201ENST00000603982 1210 ntBASIC16.49■□□□□ 0.23
NOTCH4Q99466 AC005252.2-201ENST00000624630 1141 ntBASIC16.49■□□□□ 0.23
NOTCH4Q99466 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NOTCH4Q99466 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.49■□□□□ 0.23
NOTCH4Q99466 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NOTCH4Q99466 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.49■□□□□ 0.23
NOTCH4Q99466 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NOTCH4Q99466 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NOTCH4Q99466 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NOTCH4Q99466 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
NOTCH4Q99466 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
NOTCH4Q99466 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NOTCH4Q99466 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.49■□□□□ 0.23
NOTCH4Q99466 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.48■□□□□ 0.23
NOTCH4Q99466 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.48■□□□□ 0.23
NOTCH4Q99466 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NOTCH4Q99466 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NOTCH4Q99466 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NOTCH4Q99466 BOLA2P3-201ENST00000404566 256 ntBASIC16.48■□□□□ 0.23
NOTCH4Q99466 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NOTCH4Q99466 SOCS2P1-201ENST00000417727 557 ntBASIC16.48■□□□□ 0.23
NOTCH4Q99466 AC134915.1-201ENST00000426461 574 ntBASIC16.48■□□□□ 0.23
NOTCH4Q99466 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NOTCH4Q99466 AC012441.1-201ENST00000446669 685 ntBASIC16.48■□□□□ 0.23
NOTCH4Q99466 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.48■□□□□ 0.23
NOTCH4Q99466 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.48■□□□□ 0.23
NOTCH4Q99466 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.48■□□□□ 0.23
NOTCH4Q99466 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.48■□□□□ 0.23
NOTCH4Q99466 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.48■□□□□ 0.23
NOTCH4Q99466 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NOTCH4Q99466 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.48■□□□□ 0.23
NOTCH4Q99466 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NOTCH4Q99466 AL121723.1-201ENST00000445194 1519 ntBASIC16.48■□□□□ 0.23
NOTCH4Q99466 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NOTCH4Q99466 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.48■□□□□ 0.23
NOTCH4Q99466 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NOTCH4Q99466 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NOTCH4Q99466 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
NOTCH4Q99466 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NOTCH4Q99466 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NOTCH4Q99466 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NOTCH4Q99466 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NOTCH4Q99466 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NOTCH4Q99466 AC108725.1-201ENST00000495472 409 ntBASIC16.48■□□□□ 0.23
NOTCH4Q99466 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
NOTCH4Q99466 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NOTCH4Q99466 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.48■□□□□ 0.23
NOTCH4Q99466 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.48■□□□□ 0.23
NOTCH4Q99466 AL450472.2-201ENST00000603663 1156 ntBASIC16.48■□□□□ 0.23
NOTCH4Q99466 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NOTCH4Q99466 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
NOTCH4Q99466 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NOTCH4Q99466 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NOTCH4Q99466 AP001282.1-201ENST00000531301 1499 ntBASIC16.47■□□□□ 0.23
NOTCH4Q99466 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NOTCH4Q99466 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
NOTCH4Q99466 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.47■□□□□ 0.23
NOTCH4Q99466 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NOTCH4Q99466 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NOTCH4Q99466 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NOTCH4Q99466 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NOTCH4Q99466 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NOTCH4Q99466 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.47■□□□□ 0.23
NOTCH4Q99466 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.47■□□□□ 0.23
NOTCH4Q99466 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NOTCH4Q99466 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NOTCH4Q99466 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NOTCH4Q99466 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.47■□□□□ 0.23
NOTCH4Q99466 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.47■□□□□ 0.23
NOTCH4Q99466 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms