Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSMD1Q96PZ7 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CSMD1Q96PZ7 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.65□□□□□ -0.23
CSMD1Q96PZ7 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC13.65□□□□□ -0.23
CSMD1Q96PZ7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.65□□□□□ -0.23
CSMD1Q96PZ7 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
CSMD1Q96PZ7 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
CSMD1Q96PZ7 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.65□□□□□ -0.23
CSMD1Q96PZ7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSMD1Q96PZ7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.64□□□□□ -0.23
CSMD1Q96PZ7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.64□□□□□ -0.23
CSMD1Q96PZ7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSMD1Q96PZ7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSMD1Q96PZ7 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSMD1Q96PZ7 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSMD1Q96PZ7 SERF2-206ENST00000409291 807 ntTSL 3 BASIC13.64□□□□□ -0.23
CSMD1Q96PZ7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.64□□□□□ -0.23
CSMD1Q96PZ7 PCDHB17P-201ENST00000539533 2393 ntBASIC13.64□□□□□ -0.23
CSMD1Q96PZ7 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSMD1Q96PZ7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CSMD1Q96PZ7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSMD1Q96PZ7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSMD1Q96PZ7 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.64□□□□□ -0.23
CSMD1Q96PZ7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSMD1Q96PZ7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
CSMD1Q96PZ7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CSMD1Q96PZ7 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSMD1Q96PZ7 AC036164.1-201ENST00000570544 333 ntBASIC13.64□□□□□ -0.23
CSMD1Q96PZ7 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.64□□□□□ -0.23
CSMD1Q96PZ7 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC13.64□□□□□ -0.23
CSMD1Q96PZ7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.64□□□□□ -0.23
CSMD1Q96PZ7 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.64□□□□□ -0.23
CSMD1Q96PZ7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.64□□□□□ -0.23
CSMD1Q96PZ7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSMD1Q96PZ7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSMD1Q96PZ7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSMD1Q96PZ7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSMD1Q96PZ7 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 CLUHP6-201ENST00000580789 941 ntBASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 AC092364.2-201ENST00000596710 2692 ntBASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 AC106760.1-201ENST00000508690 800 ntBASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 MIR4741-201ENST00000579822 90 ntBASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 AC133963.1-201ENST00000504166 1679 ntBASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 ACTG1P3-201ENST00000431775 1114 ntBASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 NKAIN1P1-201ENST00000435754 582 ntBASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 AL589702.1-201ENST00000641229 1509 ntBASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CSMD1Q96PZ7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 FTLP1-201ENST00000449155 526 ntBASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 PTP4A1P2-201ENST00000546033 454 ntBASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CSMD1Q96PZ7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms