Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SNED1Q8TER0 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNED1Q8TER0 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNED1Q8TER0 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC19.49■□□□□ 0.71
SNED1Q8TER0 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.49■□□□□ 0.71
SNED1Q8TER0 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNED1Q8TER0 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNED1Q8TER0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNED1Q8TER0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNED1Q8TER0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNED1Q8TER0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNED1Q8TER0 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNED1Q8TER0 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNED1Q8TER0 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNED1Q8TER0 BAATP1-201ENST00000412284 1225 ntBASIC19.49■□□□□ 0.71
SNED1Q8TER0 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC19.49■□□□□ 0.71
SNED1Q8TER0 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC19.49■□□□□ 0.71
SNED1Q8TER0 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC19.49■□□□□ 0.71
SNED1Q8TER0 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
SNED1Q8TER0 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNED1Q8TER0 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC19.49■□□□□ 0.71
SNED1Q8TER0 ARL16-210ENST00000574938 751 ntTSL 2 BASIC19.49■□□□□ 0.71
SNED1Q8TER0 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC19.49■□□□□ 0.71
SNED1Q8TER0 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNED1Q8TER0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SNED1Q8TER0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNED1Q8TER0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.49■□□□□ 0.71
SNED1Q8TER0 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNED1Q8TER0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNED1Q8TER0 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC19.48■□□□□ 0.71
SNED1Q8TER0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SNED1Q8TER0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNED1Q8TER0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNED1Q8TER0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNED1Q8TER0 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNED1Q8TER0 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNED1Q8TER0 AC134915.1-201ENST00000426461 574 ntBASIC19.48■□□□□ 0.71
SNED1Q8TER0 AC006033.1-201ENST00000440505 426 ntBASIC19.48■□□□□ 0.71
SNED1Q8TER0 AL355864.2-201ENST00000447420 863 ntBASIC19.48■□□□□ 0.71
SNED1Q8TER0 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.48■□□□□ 0.71
SNED1Q8TER0 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC19.48■□□□□ 0.71
SNED1Q8TER0 HNRNPUP1-201ENST00000554987 333 ntBASIC19.48■□□□□ 0.71
SNED1Q8TER0 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC19.48■□□□□ 0.71
SNED1Q8TER0 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNED1Q8TER0 AC243960.2-201ENST00000600996 747 ntBASIC19.48■□□□□ 0.71
SNED1Q8TER0 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC19.48■□□□□ 0.71
SNED1Q8TER0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNED1Q8TER0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.48■□□□□ 0.71
SNED1Q8TER0 AC020763.4-201ENST00000623414 4170 ntBASIC19.48■□□□□ 0.71
SNED1Q8TER0 AGER-206ENST00000375070 1463 ntTSL 5 BASIC19.47■□□□□ 0.71
SNED1Q8TER0 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SNED1Q8TER0 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNED1Q8TER0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.47■□□□□ 0.71
SNED1Q8TER0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.47■□□□□ 0.71
SNED1Q8TER0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SNED1Q8TER0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SNED1Q8TER0 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SNED1Q8TER0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SNED1Q8TER0 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SNED1Q8TER0 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC19.47■□□□□ 0.71
SNED1Q8TER0 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SNED1Q8TER0 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SNED1Q8TER0 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNED1Q8TER0 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.47■□□□□ 0.71
SNED1Q8TER0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNED1Q8TER0 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC19.47■□□□□ 0.71
SNED1Q8TER0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC19.47■□□□□ 0.71
SNED1Q8TER0 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC19.47■□□□□ 0.71
SNED1Q8TER0 VDAC1P7-201ENST00000462417 847 ntBASIC19.47■□□□□ 0.71
SNED1Q8TER0 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.47■□□□□ 0.71
SNED1Q8TER0 SLED1-202ENST00000512051 380 ntBASIC19.47■□□□□ 0.71
SNED1Q8TER0 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC19.47■□□□□ 0.71
SNED1Q8TER0 RNA5SP423-201ENST00000517127 109 ntBASIC19.47■□□□□ 0.71
SNED1Q8TER0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SNED1Q8TER0 BNIP3P1-202ENST00000550043 1585 ntBASIC19.47■□□□□ 0.71
SNED1Q8TER0 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC19.47■□□□□ 0.71
SNED1Q8TER0 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC19.47■□□□□ 0.71
SNED1Q8TER0 RHOXF1P1-202ENST00000635473 501 ntBASIC19.47■□□□□ 0.71
SNED1Q8TER0 AC008687.7-202ENST00000637404 953 ntBASIC19.47■□□□□ 0.71
SNED1Q8TER0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNED1Q8TER0 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNED1Q8TER0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.47■□□□□ 0.71
SNED1Q8TER0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNED1Q8TER0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNED1Q8TER0 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNED1Q8TER0 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.46■□□□□ 0.71
SNED1Q8TER0 HLA-A-202ENST00000376806 1854 ntBASIC19.46■□□□□ 0.71
SNED1Q8TER0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.46■□□□□ 0.71
SNED1Q8TER0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.46■□□□□ 0.71
SNED1Q8TER0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNED1Q8TER0 AC106820.2-201ENST00000563775 3264 ntBASIC19.46■□□□□ 0.71
SNED1Q8TER0 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNED1Q8TER0 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC19.46■□□□□ 0.71
SNED1Q8TER0 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SNED1Q8TER0 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNED1Q8TER0 AC136604.1-201ENST00000418535 575 ntBASIC19.46■□□□□ 0.71
SNED1Q8TER0 YBX1P6-201ENST00000442962 1002 ntBASIC19.46■□□□□ 0.71
SNED1Q8TER0 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
SNED1Q8TER0 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC19.46■□□□□ 0.71
SNED1Q8TER0 RHOQP1-201ENST00000555758 579 ntBASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms