Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
UBR1Q8IWV7 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC22.6■■□□□ 1.21
UBR1Q8IWV7 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC22.6■■□□□ 1.21
UBR1Q8IWV7 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC22.6■■□□□ 1.21
UBR1Q8IWV7 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC22.6■■□□□ 1.21
UBR1Q8IWV7 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC22.6■■□□□ 1.21
UBR1Q8IWV7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
UBR1Q8IWV7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC22.6■■□□□ 1.21
UBR1Q8IWV7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC22.6■■□□□ 1.21
UBR1Q8IWV7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
UBR1Q8IWV7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
UBR1Q8IWV7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC22.6■■□□□ 1.21
UBR1Q8IWV7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
UBR1Q8IWV7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
UBR1Q8IWV7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
UBR1Q8IWV7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
UBR1Q8IWV7 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
UBR1Q8IWV7 SDCCAG3P2-201ENST00000326105 1023 ntBASIC22.6■■□□□ 1.21
UBR1Q8IWV7 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
UBR1Q8IWV7 MIR33B-201ENST00000385104 96 ntBASIC22.6■■□□□ 1.21
UBR1Q8IWV7 AC104457.1-201ENST00000401024 814 ntBASIC22.6■■□□□ 1.21
UBR1Q8IWV7 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
UBR1Q8IWV7 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC22.6■■□□□ 1.21
UBR1Q8IWV7 GAPDHP40-201ENST00000505218 1006 ntBASIC22.6■■□□□ 1.21
UBR1Q8IWV7 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC22.6■■□□□ 1.21
UBR1Q8IWV7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
UBR1Q8IWV7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC22.59■■□□□ 1.21
UBR1Q8IWV7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
UBR1Q8IWV7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC22.59■■□□□ 1.21
UBR1Q8IWV7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
UBR1Q8IWV7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
UBR1Q8IWV7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC22.59■■□□□ 1.21
UBR1Q8IWV7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
UBR1Q8IWV7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC22.59■■□□□ 1.21
UBR1Q8IWV7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
UBR1Q8IWV7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC22.59■■□□□ 1.21
UBR1Q8IWV7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
UBR1Q8IWV7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
UBR1Q8IWV7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
UBR1Q8IWV7 AC091046.1-201ENST00000331871 207 ntBASIC22.59■■□□□ 1.21
UBR1Q8IWV7 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
UBR1Q8IWV7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
UBR1Q8IWV7 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC22.59■■□□□ 1.21
UBR1Q8IWV7 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
UBR1Q8IWV7 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC22.59■■□□□ 1.21
UBR1Q8IWV7 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC22.59■■□□□ 1.21
UBR1Q8IWV7 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC22.59■■□□□ 1.21
UBR1Q8IWV7 SPCS2P2-201ENST00000603270 608 ntBASIC22.59■■□□□ 1.21
UBR1Q8IWV7 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
UBR1Q8IWV7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
UBR1Q8IWV7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC22.59■■□□□ 1.21
UBR1Q8IWV7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
UBR1Q8IWV7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
UBR1Q8IWV7 AC134407.2-201ENST00000625089 1978 ntBASIC22.58■■□□□ 1.21
UBR1Q8IWV7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
UBR1Q8IWV7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
UBR1Q8IWV7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
UBR1Q8IWV7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
UBR1Q8IWV7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
UBR1Q8IWV7 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC22.58■■□□□ 1.21
UBR1Q8IWV7 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC22.58■■□□□ 1.21
UBR1Q8IWV7 KRT18P25-201ENST00000508931 1278 ntBASIC22.58■■□□□ 1.21
UBR1Q8IWV7 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC22.58■■□□□ 1.21
UBR1Q8IWV7 AC128714.1-201ENST00000637035 887 ntBASIC22.58■■□□□ 1.21
UBR1Q8IWV7 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
UBR1Q8IWV7 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
UBR1Q8IWV7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC22.58■■□□□ 1.2
UBR1Q8IWV7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC22.58■■□□□ 1.2
UBR1Q8IWV7 AC141586.5-201ENST00000624546 2050 ntBASIC22.58■■□□□ 1.2
UBR1Q8IWV7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
UBR1Q8IWV7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
UBR1Q8IWV7 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UBR1Q8IWV7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
UBR1Q8IWV7 AC078925.2-201ENST00000624013 1973 ntBASIC22.57■■□□□ 1.2
UBR1Q8IWV7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
UBR1Q8IWV7 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UBR1Q8IWV7 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
UBR1Q8IWV7 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UBR1Q8IWV7 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
UBR1Q8IWV7 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
UBR1Q8IWV7 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC22.57■■□□□ 1.2
UBR1Q8IWV7 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC22.57■■□□□ 1.2
UBR1Q8IWV7 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC22.57■■□□□ 1.2
UBR1Q8IWV7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
UBR1Q8IWV7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UBR1Q8IWV7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.57■■□□□ 1.2
UBR1Q8IWV7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UBR1Q8IWV7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UBR1Q8IWV7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC22.57■■□□□ 1.2
UBR1Q8IWV7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UBR1Q8IWV7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
UBR1Q8IWV7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
UBR1Q8IWV7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC22.57■■□□□ 1.2
UBR1Q8IWV7 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
UBR1Q8IWV7 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UBR1Q8IWV7 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC22.57■■□□□ 1.2
UBR1Q8IWV7 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC22.57■■□□□ 1.2
UBR1Q8IWV7 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC22.57■■□□□ 1.2
UBR1Q8IWV7 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UBR1Q8IWV7 AC244452.3-201ENST00000636814 210 ntBASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms