Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 AC190387.1-201ENST00000551683 408 ntBASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 AC004790.2-201ENST00000623588 572 ntBASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 AC073592.5-201ENST00000624854 528 ntBASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 ALOX12P2-203ENST00000570921 1945 ntBASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 AC006504.4-201ENST00000592118 1568 ntBASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 PAUPAR-201ENST00000630360 2965 ntBASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CHRFAM7AQ494W8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.33□□□□□ -0.11
CHRFAM7AQ494W8 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CHRFAM7AQ494W8 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CHRFAM7AQ494W8 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CHRFAM7AQ494W8 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
CHRFAM7AQ494W8 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CHRFAM7AQ494W8 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CHRFAM7AQ494W8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CHRFAM7AQ494W8 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
CHRFAM7AQ494W8 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CHRFAM7AQ494W8 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CHRFAM7AQ494W8 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 FAM58CP-201ENST00000435741 640 ntBASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 AC010654.1-201ENST00000615722 808 ntBASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 BCAR1-209ENST00000546196 1340 ntBASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 C8orf49-201ENST00000525043 1968 ntBASIC14.33□□□□□ -0.12
CHRFAM7AQ494W8 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 AL353593.2-201ENST00000602529 1483 ntBASIC14.32□□□□□ -0.12
CHRFAM7AQ494W8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms