Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.83■□□□□ 0.6
SHROOM1Q2M3G4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
SHROOM1Q2M3G4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.83■□□□□ 0.6
SHROOM1Q2M3G4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.83■□□□□ 0.6
SHROOM1Q2M3G4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.83■□□□□ 0.6
SHROOM1Q2M3G4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.83■□□□□ 0.6
SHROOM1Q2M3G4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.83■□□□□ 0.6
SHROOM1Q2M3G4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.83■□□□□ 0.6
SHROOM1Q2M3G4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.83■□□□□ 0.6
SHROOM1Q2M3G4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
SHROOM1Q2M3G4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.83■□□□□ 0.6
SHROOM1Q2M3G4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHROOM1Q2M3G4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHROOM1Q2M3G4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHROOM1Q2M3G4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.83■□□□□ 0.6
SHROOM1Q2M3G4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SHROOM1Q2M3G4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 KRT18P64-201ENST00000434946 1219 ntBASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 AL391069.4-201ENST00000609583 481 ntBASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 HCG11-201ENST00000411553 5696 ntBASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.82■□□□□ 0.6
SHROOM1Q2M3G4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 POU5F1P6-201ENST00000466990 990 ntBASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 AC099568.2-201ENST00000609194 695 ntBASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 Z97205.2-201ENST00000564697 1639 ntBASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.81■□□□□ 0.6
SHROOM1Q2M3G4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 FO393414.2-201ENST00000405153 598 ntBASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 EEF1DP4-201ENST00000446006 880 ntBASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 ACA64.2-201ENST00000459014 129 ntBASIC18.8■□□□□ 0.6
SHROOM1Q2M3G4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms