Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CBX1P83916 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX1P83916 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CBX1P83916 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX1P83916 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX1P83916 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.05■□□□□ 0.32
CBX1P83916 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CBX1P83916 GUSBP6-202ENST00000438529 1198 ntBASIC17.05■□□□□ 0.32
CBX1P83916 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.05■□□□□ 0.32
CBX1P83916 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CBX1P83916 UNC93B4-201ENST00000505679 747 ntBASIC17.05■□□□□ 0.32
CBX1P83916 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.05■□□□□ 0.32
CBX1P83916 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.05■□□□□ 0.32
CBX1P83916 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX1P83916 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.05■□□□□ 0.32
CBX1P83916 AL137784.2-201ENST00000607332 1000 ntBASIC17.05■□□□□ 0.32
CBX1P83916 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.05■□□□□ 0.32
CBX1P83916 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX1P83916 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CBX1P83916 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
CBX1P83916 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CBX1P83916 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CBX1P83916 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX1P83916 AC090616.6-203ENST00000579186 1945 ntBASIC17.05■□□□□ 0.32
CBX1P83916 BX640514.1-201ENST00000583223 1918 ntBASIC17.05■□□□□ 0.32
CBX1P83916 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX1P83916 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX1P83916 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
CBX1P83916 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CBX1P83916 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.05■□□□□ 0.32
CBX1P83916 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.05■□□□□ 0.32
CBX1P83916 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CBX1P83916 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CBX1P83916 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CBX1P83916 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.05■□□□□ 0.32
CBX1P83916 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
CBX1P83916 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX1P83916 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC17.04■□□□□ 0.32
CBX1P83916 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX1P83916 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CBX1P83916 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CBX1P83916 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX1P83916 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX1P83916 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX1P83916 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX1P83916 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX1P83916 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC17.04■□□□□ 0.32
CBX1P83916 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX1P83916 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CBX1P83916 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX1P83916 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX1P83916 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.04■□□□□ 0.32
CBX1P83916 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC17.04■□□□□ 0.32
CBX1P83916 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CBX1P83916 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.04■□□□□ 0.32
CBX1P83916 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.04■□□□□ 0.32
CBX1P83916 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
CBX1P83916 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.04■□□□□ 0.32
CBX1P83916 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX1P83916 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.04■□□□□ 0.32
CBX1P83916 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX1P83916 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.04■□□□□ 0.32
CBX1P83916 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX1P83916 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX1P83916 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.04■□□□□ 0.32
CBX1P83916 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.04■□□□□ 0.32
CBX1P83916 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.04■□□□□ 0.32
CBX1P83916 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX1P83916 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CBX1P83916 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX1P83916 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX1P83916 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
CBX1P83916 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX1P83916 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CBX1P83916 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CBX1P83916 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CBX1P83916 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CBX1P83916 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX1P83916 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CBX1P83916 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CBX1P83916 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
CBX1P83916 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CBX1P83916 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CBX1P83916 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX1P83916 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX1P83916 AC092127.1-201ENST00000567093 3455 ntBASIC17.03■□□□□ 0.32
CBX1P83916 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CBX1P83916 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CBX1P83916 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX1P83916 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX1P83916 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CBX1P83916 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX1P83916 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CBX1P83916 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX1P83916 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CBX1P83916 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.03■□□□□ 0.32
CBX1P83916 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.03■□□□□ 0.32
CBX1P83916 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CBX1P83916 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.03■□□□□ 0.32
CBX1P83916 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms