Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 ELP6-209ENST00000446787 894 ntTSL 3 BASIC11.46□□□□□ -0.58
PRKDCP78527 AP003171.2-201ENST00000528208 925 ntBASIC11.46□□□□□ -0.58
PRKDCP78527 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC11.46□□□□□ -0.58
PRKDCP78527 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
PRKDCP78527 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
PRKDCP78527 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
PRKDCP78527 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC11.46□□□□□ -0.58
PRKDCP78527 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PRKDCP78527 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PRKDCP78527 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PRKDCP78527 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
PRKDCP78527 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC11.46□□□□□ -0.58
PRKDCP78527 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PRKDCP78527 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PRKDCP78527 BRI3P1-201ENST00000440440 378 ntBASIC11.45□□□□□ -0.58
PRKDCP78527 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC11.45□□□□□ -0.58
PRKDCP78527 GPX4-206ENST00000588919 803 ntTSL 2 BASIC11.45□□□□□ -0.58
PRKDCP78527 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC11.45□□□□□ -0.58
PRKDCP78527 AL353770.1-201ENST00000614915 403 ntBASIC11.45□□□□□ -0.58
PRKDCP78527 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC11.45□□□□□ -0.58
PRKDCP78527 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
PRKDCP78527 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PRKDCP78527 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
PRKDCP78527 AC009053.2-201ENST00000563701 2365 ntBASIC11.45□□□□□ -0.58
PRKDCP78527 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC11.45□□□□□ -0.58
PRKDCP78527 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC11.45□□□□□ -0.58
PRKDCP78527 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
PRKDCP78527 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
PRKDCP78527 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PRKDCP78527 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC11.45□□□□□ -0.58
PRKDCP78527 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
PRKDCP78527 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC11.45□□□□□ -0.58
PRKDCP78527 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC11.45□□□□□ -0.58
PRKDCP78527 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC11.45□□□□□ -0.58
PRKDCP78527 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC11.45□□□□□ -0.58
PRKDCP78527 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC11.45□□□□□ -0.58
PRKDCP78527 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
PRKDCP78527 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PRKDCP78527 AC116353.5-201ENST00000638148 1699 ntBASIC11.45□□□□□ -0.58
PRKDCP78527 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PRKDCP78527 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC11.45□□□□□ -0.58
PRKDCP78527 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC11.45□□□□□ -0.58
PRKDCP78527 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
PRKDCP78527 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PRKDCP78527 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC11.45□□□□□ -0.58
PRKDCP78527 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
PRKDCP78527 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC11.45□□□□□ -0.58
PRKDCP78527 AC087045.2-201ENST00000606279 1003 ntBASIC11.45□□□□□ -0.58
PRKDCP78527 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC11.45□□□□□ -0.58
PRKDCP78527 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PRKDCP78527 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PRKDCP78527 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PRKDCP78527 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PRKDCP78527 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PRKDCP78527 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
PRKDCP78527 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
PRKDCP78527 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
PRKDCP78527 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC11.45□□□□□ -0.58
PRKDCP78527 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC11.45□□□□□ -0.58
PRKDCP78527 MIR4754-201ENST00000582477 89 ntBASIC11.45□□□□□ -0.58
PRKDCP78527 AC007663.3-201ENST00000609632 465 ntBASIC11.45□□□□□ -0.58
PRKDCP78527 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PRKDCP78527 AL121723.1-201ENST00000445194 1519 ntBASIC11.45□□□□□ -0.58
PRKDCP78527 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PRKDCP78527 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PRKDCP78527 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
PRKDCP78527 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PRKDCP78527 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC11.44□□□□□ -0.58
PRKDCP78527 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PRKDCP78527 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PRKDCP78527 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PRKDCP78527 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC11.44□□□□□ -0.58
PRKDCP78527 GRN-214ENST00000589265 1632 ntTSL 5 BASIC11.44□□□□□ -0.58
PRKDCP78527 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PRKDCP78527 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC11.44□□□□□ -0.58
PRKDCP78527 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC11.44□□□□□ -0.58
PRKDCP78527 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC11.44□□□□□ -0.58
PRKDCP78527 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
PRKDCP78527 AL354989.2-201ENST00000435838 1540 ntBASIC11.44□□□□□ -0.58
PRKDCP78527 U82695.1-201ENST00000635752 1889 ntBASIC11.44□□□□□ -0.58
PRKDCP78527 CD276-201ENST00000318424 2738 ntTSL 5 BASIC11.44□□□□□ -0.58
PRKDCP78527 AC116345.2-201ENST00000512837 523 ntBASIC11.44□□□□□ -0.58
PRKDCP78527 ALG1L13P-202ENST00000519320 584 ntBASIC11.44□□□□□ -0.58
PRKDCP78527 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
PRKDCP78527 MIR4321-201ENST00000592276 80 ntBASIC11.44□□□□□ -0.58
PRKDCP78527 AC007718.1-201ENST00000621078 280 ntBASIC11.44□□□□□ -0.58
PRKDCP78527 AP000974.1-201ENST00000623909 2387 ntBASIC11.44□□□□□ -0.58
PRKDCP78527 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC11.44□□□□□ -0.58
PRKDCP78527 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC11.44□□□□□ -0.58
PRKDCP78527 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
PRKDCP78527 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC11.44□□□□□ -0.58
PRKDCP78527 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
PRKDCP78527 AC007787.1-201ENST00000588095 1583 ntBASIC11.44□□□□□ -0.58
PRKDCP78527 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PRKDCP78527 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PRKDCP78527 AL512430.1-201ENST00000392575 860 ntBASIC11.44□□□□□ -0.58
PRKDCP78527 DNAJB1P1-201ENST00000429417 1024 ntBASIC11.44□□□□□ -0.58
PRKDCP78527 AGPAT5P1-201ENST00000455855 1019 ntBASIC11.44□□□□□ -0.58
PRKDCP78527 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC11.44□□□□□ -0.58
PRKDCP78527 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms