Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
MTHFRP42898 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.98■□□□□ 0.31
MTHFRP42898 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
MTHFRP42898 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.98■□□□□ 0.31
MTHFRP42898 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MTHFRP42898 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.98■□□□□ 0.31
MTHFRP42898 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
MTHFRP42898 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MTHFRP42898 AC098850.1-201ENST00000419919 790 ntBASIC16.98■□□□□ 0.31
MTHFRP42898 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MTHFRP42898 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
MTHFRP42898 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
MTHFRP42898 AC104596.2-201ENST00000512793 793 ntBASIC16.98■□□□□ 0.31
MTHFRP42898 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
MTHFRP42898 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
MTHFRP42898 FAM8A2P-201ENST00000528813 1142 ntBASIC16.98■□□□□ 0.31
MTHFRP42898 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MTHFRP42898 TIMM17BP1-201ENST00000545713 516 ntBASIC16.98■□□□□ 0.31
MTHFRP42898 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
MTHFRP42898 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.98■□□□□ 0.31
MTHFRP42898 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.98■□□□□ 0.31
MTHFRP42898 MIR6775-201ENST00000617557 69 ntBASIC16.98■□□□□ 0.31
MTHFRP42898 AL033527.5-201ENST00000641382 801 ntBASIC16.98■□□□□ 0.31
MTHFRP42898 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MTHFRP42898 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.98■□□□□ 0.31
MTHFRP42898 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MTHFRP42898 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.98■□□□□ 0.31
MTHFRP42898 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MTHFRP42898 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MTHFRP42898 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
MTHFRP42898 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MTHFRP42898 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MTHFRP42898 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.98■□□□□ 0.31
MTHFRP42898 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
MTHFRP42898 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
MTHFRP42898 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
MTHFRP42898 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
MTHFRP42898 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MTHFRP42898 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
MTHFRP42898 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.97■□□□□ 0.31
MTHFRP42898 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.97■□□□□ 0.31
MTHFRP42898 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
MTHFRP42898 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MTHFRP42898 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
MTHFRP42898 KRT43P-201ENST00000434019 910 ntBASIC16.97■□□□□ 0.31
MTHFRP42898 AC104989.1-201ENST00000519711 778 ntBASIC16.97■□□□□ 0.31
MTHFRP42898 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.97■□□□□ 0.31
MTHFRP42898 AC092552.1-201ENST00000547243 906 ntBASIC16.97■□□□□ 0.31
MTHFRP42898 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.97■□□□□ 0.31
MTHFRP42898 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.97■□□□□ 0.31
MTHFRP42898 AC008735.3-201ENST00000596646 500 ntBASIC16.97■□□□□ 0.31
MTHFRP42898 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MTHFRP42898 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.97■□□□□ 0.31
MTHFRP42898 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MTHFRP42898 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MTHFRP42898 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MTHFRP42898 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MTHFRP42898 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MTHFRP42898 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
MTHFRP42898 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
MTHFRP42898 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MTHFRP42898 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
MTHFRP42898 SNX33P1-201ENST00000592116 1762 ntBASIC16.97■□□□□ 0.31
MTHFRP42898 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
MTHFRP42898 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
MTHFRP42898 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MTHFRP42898 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.96■□□□□ 0.31
MTHFRP42898 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.96■□□□□ 0.31
MTHFRP42898 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
MTHFRP42898 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MTHFRP42898 REXO1L6P-201ENST00000603433 1515 ntBASIC16.96■□□□□ 0.31
MTHFRP42898 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
MTHFRP42898 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MTHFRP42898 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.96■□□□□ 0.31
MTHFRP42898 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.96■□□□□ 0.31
MTHFRP42898 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
MTHFRP42898 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
MTHFRP42898 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
MTHFRP42898 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.96■□□□□ 0.31
MTHFRP42898 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MTHFRP42898 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
MTHFRP42898 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.96■□□□□ 0.31
MTHFRP42898 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MTHFRP42898 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
MTHFRP42898 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.96■□□□□ 0.31
MTHFRP42898 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MTHFRP42898 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.96■□□□□ 0.31
MTHFRP42898 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.96■□□□□ 0.31
MTHFRP42898 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.96■□□□□ 0.31
MTHFRP42898 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.96■□□□□ 0.31
MTHFRP42898 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MTHFRP42898 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.96■□□□□ 0.31
MTHFRP42898 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MTHFRP42898 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.96■□□□□ 0.31
MTHFRP42898 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.96■□□□□ 0.31
MTHFRP42898 AC074044.1-201ENST00000609673 707 ntBASIC16.96■□□□□ 0.31
MTHFRP42898 MIR8072-201ENST00000614241 80 ntBASIC16.96■□□□□ 0.31
MTHFRP42898 AL139011.1-202ENST00000642063 584 ntBASIC16.96■□□□□ 0.31
MTHFRP42898 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
MTHFRP42898 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms