Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.56■□□□□ 0.08
KRT20P35900 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KRT20P35900 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.56■□□□□ 0.08
KRT20P35900 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT20P35900 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.56■□□□□ 0.08
KRT20P35900 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT20P35900 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
KRT20P35900 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.56■□□□□ 0.08
KRT20P35900 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
KRT20P35900 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KRT20P35900 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KRT20P35900 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
KRT20P35900 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT20P35900 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT20P35900 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT20P35900 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT20P35900 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.55■□□□□ 0.08
KRT20P35900 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
KRT20P35900 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
KRT20P35900 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.55■□□□□ 0.08
KRT20P35900 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT20P35900 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT20P35900 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT20P35900 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KRT20P35900 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT20P35900 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KRT20P35900 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.55■□□□□ 0.08
KRT20P35900 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT20P35900 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT20P35900 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.55■□□□□ 0.08
KRT20P35900 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT20P35900 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.55■□□□□ 0.08
KRT20P35900 LINC00895-201ENST00000629028 1637 ntBASIC15.55■□□□□ 0.08
KRT20P35900 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
KRT20P35900 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.55■□□□□ 0.08
KRT20P35900 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.55■□□□□ 0.08
KRT20P35900 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT20P35900 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT20P35900 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT20P35900 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
KRT20P35900 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
KRT20P35900 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.55■□□□□ 0.08
KRT20P35900 HCG4B-203ENST00000450128 991 ntBASIC15.55■□□□□ 0.08
KRT20P35900 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.55■□□□□ 0.08
KRT20P35900 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT20P35900 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.55■□□□□ 0.08
KRT20P35900 OR7E47P-204ENST00000575924 449 ntBASIC15.55■□□□□ 0.08
KRT20P35900 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KRT20P35900 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT20P35900 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT20P35900 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT20P35900 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT20P35900 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KRT20P35900 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT20P35900 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT20P35900 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
KRT20P35900 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT20P35900 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT20P35900 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT20P35900 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT20P35900 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.55■□□□□ 0.08
KRT20P35900 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
KRT20P35900 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRT20P35900 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.54■□□□□ 0.08
KRT20P35900 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.54■□□□□ 0.08
KRT20P35900 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.54■□□□□ 0.08
KRT20P35900 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.54■□□□□ 0.08
KRT20P35900 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
KRT20P35900 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT20P35900 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRT20P35900 AC012569.1-201ENST00000591191 1524 ntBASIC15.54■□□□□ 0.08
KRT20P35900 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT20P35900 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.54■□□□□ 0.08
KRT20P35900 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT20P35900 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.54■□□□□ 0.08
KRT20P35900 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT20P35900 MIR940-201ENST00000401276 94 ntBASIC15.54■□□□□ 0.08
KRT20P35900 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.54■□□□□ 0.08
KRT20P35900 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRT20P35900 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRT20P35900 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRT20P35900 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.54■□□□□ 0.08
KRT20P35900 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.54■□□□□ 0.08
KRT20P35900 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.54■□□□□ 0.08
KRT20P35900 AC096734.2-201ENST00000562054 433 ntBASIC15.54■□□□□ 0.08
KRT20P35900 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.54■□□□□ 0.08
KRT20P35900 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.54■□□□□ 0.08
KRT20P35900 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
KRT20P35900 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.54■□□□□ 0.08
KRT20P35900 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.54■□□□□ 0.08
KRT20P35900 FAM197Y3-203ENST00000618346 717 ntBASIC15.54■□□□□ 0.08
KRT20P35900 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.54■□□□□ 0.08
KRT20P35900 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
KRT20P35900 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.54■□□□□ 0.08
KRT20P35900 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
KRT20P35900 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
KRT20P35900 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.54■□□□□ 0.08
KRT20P35900 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRT20P35900 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.54■□□□□ 0.08
KRT20P35900 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms