Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM3P06753 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TPM3P06753 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.33■□□□□ 0.52
TPM3P06753 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM3P06753 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.33■□□□□ 0.52
TPM3P06753 LINC01101-201ENST00000622953 1884 ntBASIC18.33■□□□□ 0.52
TPM3P06753 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.52
TPM3P06753 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TPM3P06753 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM3P06753 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
TPM3P06753 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM3P06753 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TPM3P06753 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TPM3P06753 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM3P06753 GPAA1P2-202ENST00000606848 1787 ntBASIC18.32■□□□□ 0.52
TPM3P06753 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TPM3P06753 TCAF2P1-201ENST00000291129 2421 ntBASIC18.32■□□□□ 0.52
TPM3P06753 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TPM3P06753 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM3P06753 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM3P06753 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM3P06753 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
TPM3P06753 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM3P06753 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TPM3P06753 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM3P06753 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM3P06753 AC211429.1-201ENST00000415277 523 ntBASIC18.32■□□□□ 0.52
TPM3P06753 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.32■□□□□ 0.52
TPM3P06753 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.32■□□□□ 0.52
TPM3P06753 LINC00265-3P-201ENST00000447588 903 ntBASIC18.32■□□□□ 0.52
TPM3P06753 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TPM3P06753 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TPM3P06753 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TPM3P06753 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.32■□□□□ 0.52
TPM3P06753 AC074051.2-201ENST00000565115 352 ntBASIC18.32■□□□□ 0.52
TPM3P06753 MIR4492-201ENST00000581627 80 ntBASIC18.32■□□□□ 0.52
TPM3P06753 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM3P06753 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.32■□□□□ 0.52
TPM3P06753 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC18.32■□□□□ 0.52
TPM3P06753 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM3P06753 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TPM3P06753 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.32■□□□□ 0.52
TPM3P06753 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.32■□□□□ 0.52
TPM3P06753 OR2I1P-209ENST00000641730 5365 ntBASIC18.32■□□□□ 0.52
TPM3P06753 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM3P06753 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TPM3P06753 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.32■□□□□ 0.52
TPM3P06753 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TPM3P06753 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC18.32■□□□□ 0.52
TPM3P06753 GRK6P1-201ENST00000400595 1711 ntBASIC18.32■□□□□ 0.52
TPM3P06753 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM3P06753 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TPM3P06753 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM3P06753 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM3P06753 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.31■□□□□ 0.52
TPM3P06753 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
TPM3P06753 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC18.31■□□□□ 0.52
TPM3P06753 AC005332.1-201ENST00000577698 1310 ntBASIC18.31■□□□□ 0.52
TPM3P06753 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC18.31■□□□□ 0.52
TPM3P06753 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.31■□□□□ 0.52
TPM3P06753 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM3P06753 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM3P06753 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM3P06753 AC136621.1-201ENST00000624017 2304 ntBASIC18.31■□□□□ 0.52
TPM3P06753 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM3P06753 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TPM3P06753 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM3P06753 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM3P06753 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TPM3P06753 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TPM3P06753 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM3P06753 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TPM3P06753 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.31■□□□□ 0.52
TPM3P06753 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.31■□□□□ 0.52
TPM3P06753 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM3P06753 AC104819.1-201ENST00000504587 486 ntBASIC18.31■□□□□ 0.52
TPM3P06753 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM3P06753 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.31■□□□□ 0.52
TPM3P06753 AC092329.2-201ENST00000598402 547 ntBASIC18.31■□□□□ 0.52
TPM3P06753 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM3P06753 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM3P06753 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.31■□□□□ 0.52
TPM3P06753 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.31■□□□□ 0.52
TPM3P06753 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM3P06753 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM3P06753 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM3P06753 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM3P06753 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TPM3P06753 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM3P06753 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM3P06753 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
TPM3P06753 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TPM3P06753 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM3P06753 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TPM3P06753 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.3■□□□□ 0.52
TPM3P06753 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM3P06753 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM3P06753 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM3P06753 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TPM3P06753 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms