Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
P04436 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.85□□□□□ -0.03
P04436 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04436 AC011676.5-201ENST00000624864 2660 ntBASIC14.85□□□□□ -0.03
P04436 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
P04436 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.85□□□□□ -0.03
P04436 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04436 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04436 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
P04436 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04436 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.84□□□□□ -0.03
P04436 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
P04436 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.84□□□□□ -0.03
P04436 AL139010.1-201ENST00000454878 894 ntBASIC14.84□□□□□ -0.03
P04436 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.84□□□□□ -0.03
P04436 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.84□□□□□ -0.03
P04436 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.84□□□□□ -0.03
P04436 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
P04436 AC068587.6-202ENST00000641839 5619 ntBASIC14.84□□□□□ -0.03
P04436 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.84□□□□□ -0.03
P04436 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.84□□□□□ -0.03
P04436 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 AC092171.3-201ENST00000610122 2651 ntBASIC14.84□□□□□ -0.03
P04436 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.84□□□□□ -0.03
P04436 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
P04436 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.84□□□□□ -0.03
P04436 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
P04436 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
P04436 AC100757.3-201ENST00000622361 1406 ntBASIC14.83□□□□□ -0.03
P04436 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
P04436 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
P04436 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
P04436 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
P04436 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
P04436 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04436 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04436 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04436 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04436 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
P04436 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04436 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
P04436 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04436 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.83□□□□□ -0.04
P04436 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.83□□□□□ -0.04
P04436 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.83□□□□□ -0.04
P04436 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.83□□□□□ -0.04
P04436 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.83□□□□□ -0.04
P04436 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.83□□□□□ -0.04
P04436 MIR3197-201ENST00000582241 73 ntBASIC14.83□□□□□ -0.04
P04436 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.83□□□□□ -0.04
P04436 AL590560.3-201ENST00000623350 461 ntBASIC14.83□□□□□ -0.04
P04436 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.83□□□□□ -0.04
P04436 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.83□□□□□ -0.04
P04436 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04436 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04436 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04436 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04436 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
P04436 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
P04436 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
P04436 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04436 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
P04436 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04436 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
P04436 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04436 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
P04436 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
P04436 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04436 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04436 AGGF1P2-201ENST00000426656 2106 ntBASIC14.83□□□□□ -0.04
P04436 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P04436 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms