Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP17L11C9JVI0 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP17L11C9JVI0 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
USP17L11C9JVI0 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.78■□□□□ 0.6
USP17L11C9JVI0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.78■□□□□ 0.6
USP17L11C9JVI0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.78■□□□□ 0.6
USP17L11C9JVI0 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP17L11C9JVI0 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.78■□□□□ 0.6
USP17L11C9JVI0 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
USP17L11C9JVI0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP17L11C9JVI0 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
USP17L11C9JVI0 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP17L11C9JVI0 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP17L11C9JVI0 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP17L11C9JVI0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.78■□□□□ 0.6
USP17L11C9JVI0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP17L11C9JVI0 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP17L11C9JVI0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP17L11C9JVI0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP17L11C9JVI0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.78■□□□□ 0.6
USP17L11C9JVI0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP17L11C9JVI0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.78■□□□□ 0.6
USP17L11C9JVI0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP17L11C9JVI0 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP17L11C9JVI0 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.78■□□□□ 0.6
USP17L11C9JVI0 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP17L11C9JVI0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP17L11C9JVI0 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
USP17L11C9JVI0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.77■□□□□ 0.6
USP17L11C9JVI0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.77■□□□□ 0.6
USP17L11C9JVI0 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
USP17L11C9JVI0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.77■□□□□ 0.6
USP17L11C9JVI0 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP17L11C9JVI0 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP17L11C9JVI0 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.77■□□□□ 0.6
USP17L11C9JVI0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.77■□□□□ 0.6
USP17L11C9JVI0 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
USP17L11C9JVI0 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.77■□□□□ 0.6
USP17L11C9JVI0 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.77■□□□□ 0.6
USP17L11C9JVI0 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.77■□□□□ 0.6
USP17L11C9JVI0 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP17L11C9JVI0 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.77■□□□□ 0.6
USP17L11C9JVI0 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.77■□□□□ 0.6
USP17L11C9JVI0 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.77■□□□□ 0.6
USP17L11C9JVI0 AC132938.2-201ENST00000579188 680 ntBASIC18.77■□□□□ 0.6
USP17L11C9JVI0 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.77■□□□□ 0.6
USP17L11C9JVI0 AL591163.1-201ENST00000641757 987 ntBASIC18.77■□□□□ 0.6
USP17L11C9JVI0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP17L11C9JVI0 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP17L11C9JVI0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP17L11C9JVI0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
USP17L11C9JVI0 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP17L11C9JVI0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.77■□□□□ 0.6
USP17L11C9JVI0 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP17L11C9JVI0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
USP17L11C9JVI0 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.77■□□□□ 0.59
USP17L11C9JVI0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.77■□□□□ 0.59
USP17L11C9JVI0 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
USP17L11C9JVI0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP17L11C9JVI0 AC005622.1-201ENST00000636801 1703 ntBASIC18.77■□□□□ 0.59
USP17L11C9JVI0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
USP17L11C9JVI0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
USP17L11C9JVI0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.76■□□□□ 0.59
USP17L11C9JVI0 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.76■□□□□ 0.59
USP17L11C9JVI0 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP17L11C9JVI0 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.76■□□□□ 0.59
USP17L11C9JVI0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.76■□□□□ 0.59
USP17L11C9JVI0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP17L11C9JVI0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP17L11C9JVI0 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
USP17L11C9JVI0 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.76■□□□□ 0.59
USP17L11C9JVI0 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.76■□□□□ 0.59
USP17L11C9JVI0 IGHV3-71-201ENST00000523324 359 ntBASIC18.76■□□□□ 0.59
USP17L11C9JVI0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.76■□□□□ 0.59
USP17L11C9JVI0 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.76■□□□□ 0.59
USP17L11C9JVI0 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.76■□□□□ 0.59
USP17L11C9JVI0 AC023310.3-201ENST00000557027 670 ntBASIC18.76■□□□□ 0.59
USP17L11C9JVI0 AC100756.1-201ENST00000562736 682 ntBASIC18.76■□□□□ 0.59
USP17L11C9JVI0 AC138749.3-201ENST00000567691 622 ntBASIC18.76■□□□□ 0.59
USP17L11C9JVI0 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.76■□□□□ 0.59
USP17L11C9JVI0 AC099568.2-201ENST00000609194 695 ntBASIC18.76■□□□□ 0.59
USP17L11C9JVI0 AC116165.1-201ENST00000611806 668 ntBASIC18.76■□□□□ 0.59
USP17L11C9JVI0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP17L11C9JVI0 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP17L11C9JVI0 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP17L11C9JVI0 LINC01144-201ENST00000626198 1710 ntBASIC18.76■□□□□ 0.59
USP17L11C9JVI0 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.76■□□□□ 0.59
USP17L11C9JVI0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.76■□□□□ 0.59
USP17L11C9JVI0 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP17L11C9JVI0 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP17L11C9JVI0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP17L11C9JVI0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.76■□□□□ 0.59
USP17L11C9JVI0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
USP17L11C9JVI0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.76■□□□□ 0.59
USP17L11C9JVI0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP17L11C9JVI0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP17L11C9JVI0 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP17L11C9JVI0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms