Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RIMBP3Q9UFD9 RNMTL1P1-201ENST00000454103 560 ntBASIC25.12■■□□□ 1.61
RIMBP3Q9UFD9 BUD31-205ENST00000456893 512 ntTSL 5 BASIC25.12■■□□□ 1.61
RIMBP3Q9UFD9 HKR1-225ENST00000592168 566 ntTSL 4 BASIC25.12■■□□□ 1.61
RIMBP3Q9UFD9 KRT8P29-201ENST00000420409 1371 ntBASIC25.12■■□□□ 1.61
RIMBP3Q9UFD9 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RIMBP3Q9UFD9 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RIMBP3Q9UFD9 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC25.11■■□□□ 1.61
RIMBP3Q9UFD9 AL512652.2-201ENST00000625156 1716 ntBASIC25.11■■□□□ 1.61
RIMBP3Q9UFD9 U82695.1-201ENST00000635752 1889 ntBASIC25.11■■□□□ 1.61
RIMBP3Q9UFD9 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC25.11■■□□□ 1.61
RIMBP3Q9UFD9 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RIMBP3Q9UFD9 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC25.11■■□□□ 1.61
RIMBP3Q9UFD9 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC25.11■■□□□ 1.61
RIMBP3Q9UFD9 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC25.11■■□□□ 1.61
RIMBP3Q9UFD9 AL031713.1-201ENST00000564813 661 ntBASIC25.11■■□□□ 1.61
RIMBP3Q9UFD9 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
RIMBP3Q9UFD9 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC25.11■■□□□ 1.61
RIMBP3Q9UFD9 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RIMBP3Q9UFD9 MRPL37P1-201ENST00000592451 1337 ntBASIC25.1■■□□□ 1.61
RIMBP3Q9UFD9 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RIMBP3Q9UFD9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RIMBP3Q9UFD9 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RIMBP3Q9UFD9 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
RIMBP3Q9UFD9 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RIMBP3Q9UFD9 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RIMBP3Q9UFD9 AC004522.1-201ENST00000419978 654 ntBASIC25.1■■□□□ 1.61
RIMBP3Q9UFD9 FAM8A4P-201ENST00000435433 1213 ntBASIC25.1■■□□□ 1.61
RIMBP3Q9UFD9 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC25.1■■□□□ 1.61
RIMBP3Q9UFD9 AL160314.3-201ENST00000556041 767 ntBASIC25.1■■□□□ 1.61
RIMBP3Q9UFD9 ZACNP1-201ENST00000612259 710 ntBASIC25.1■■□□□ 1.61
RIMBP3Q9UFD9 AL161773.1-201ENST00000624845 863 ntBASIC25.1■■□□□ 1.61
RIMBP3Q9UFD9 AC068587.8-201ENST00000641239 219 ntBASIC25.1■■□□□ 1.61
RIMBP3Q9UFD9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RIMBP3Q9UFD9 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RIMBP3Q9UFD9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RIMBP3Q9UFD9 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RIMBP3Q9UFD9 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RIMBP3Q9UFD9 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
RIMBP3Q9UFD9 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC25.1■■□□□ 1.61
RIMBP3Q9UFD9 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RIMBP3Q9UFD9 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC25.1■■□□□ 1.61
RIMBP3Q9UFD9 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RIMBP3Q9UFD9 AL355312.1-201ENST00000407115 2176 ntBASIC25.09■■□□□ 1.61
RIMBP3Q9UFD9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
RIMBP3Q9UFD9 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RIMBP3Q9UFD9 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RIMBP3Q9UFD9 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
RIMBP3Q9UFD9 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
RIMBP3Q9UFD9 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC25.09■■□□□ 1.61
RIMBP3Q9UFD9 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RIMBP3Q9UFD9 AGPAT5P1-201ENST00000455855 1019 ntBASIC25.09■■□□□ 1.61
RIMBP3Q9UFD9 AC100850.1-201ENST00000506768 649 ntBASIC25.09■■□□□ 1.61
RIMBP3Q9UFD9 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC25.09■■□□□ 1.61
RIMBP3Q9UFD9 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC25.09■■□□□ 1.61
RIMBP3Q9UFD9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RIMBP3Q9UFD9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC25.09■■□□□ 1.61
RIMBP3Q9UFD9 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
RIMBP3Q9UFD9 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
RIMBP3Q9UFD9 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
RIMBP3Q9UFD9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
RIMBP3Q9UFD9 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC25.09■■□□□ 1.61
RIMBP3Q9UFD9 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RIMBP3Q9UFD9 GGT4P-201ENST00000623672 1708 ntBASIC25.09■■□□□ 1.61
RIMBP3Q9UFD9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RIMBP3Q9UFD9 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RIMBP3Q9UFD9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RIMBP3Q9UFD9 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC25.09■■□□□ 1.61
RIMBP3Q9UFD9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RIMBP3Q9UFD9 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RIMBP3Q9UFD9 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC25.08■■□□□ 1.61
RIMBP3Q9UFD9 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC25.08■■□□□ 1.61
RIMBP3Q9UFD9 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC25.08■■□□□ 1.61
RIMBP3Q9UFD9 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RIMBP3Q9UFD9 AC124947.2-201ENST00000547118 1133 ntBASIC25.08■■□□□ 1.61
RIMBP3Q9UFD9 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RIMBP3Q9UFD9 AL691432.1-201ENST00000596308 1422 ntBASIC25.08■■□□□ 1.61
RIMBP3Q9UFD9 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
RIMBP3Q9UFD9 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RIMBP3Q9UFD9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
RIMBP3Q9UFD9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC25.08■■□□□ 1.61
RIMBP3Q9UFD9 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RIMBP3Q9UFD9 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
RIMBP3Q9UFD9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC25.08■■□□□ 1.61
RIMBP3Q9UFD9 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
RIMBP3Q9UFD9 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
RIMBP3Q9UFD9 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC25.08■■□□□ 1.61
RIMBP3Q9UFD9 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC25.08■■□□□ 1.61
RIMBP3Q9UFD9 UROS-201ENST00000368774 744 ntTSL 2 BASIC25.08■■□□□ 1.6
RIMBP3Q9UFD9 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
RIMBP3Q9UFD9 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.6
RIMBP3Q9UFD9 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
RIMBP3Q9UFD9 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
RIMBP3Q9UFD9 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC25.08■■□□□ 1.6
RIMBP3Q9UFD9 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC25.08■■□□□ 1.6
RIMBP3Q9UFD9 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC25.08■■□□□ 1.6
RIMBP3Q9UFD9 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC25.08■■□□□ 1.6
RIMBP3Q9UFD9 MIR5196-201ENST00000578146 115 ntBASIC25.08■■□□□ 1.6
RIMBP3Q9UFD9 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
RIMBP3Q9UFD9 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms