Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE1Q99829 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CPNE1Q99829 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE1Q99829 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE1Q99829 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CPNE1Q99829 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.3■□□□□ 0.2
CPNE1Q99829 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.3■□□□□ 0.2
CPNE1Q99829 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.3■□□□□ 0.2
CPNE1Q99829 AL031284.1-201ENST00000419297 478 ntBASIC16.3■□□□□ 0.2
CPNE1Q99829 AC009947.1-201ENST00000444350 727 ntBASIC16.3■□□□□ 0.2
CPNE1Q99829 HCG4B-203ENST00000450128 991 ntBASIC16.3■□□□□ 0.2
CPNE1Q99829 AC245100.5-201ENST00000452108 331 ntBASIC16.3■□□□□ 0.2
CPNE1Q99829 KRT18P34-201ENST00000488218 1270 ntBASIC16.3■□□□□ 0.2
CPNE1Q99829 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE1Q99829 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.3■□□□□ 0.2
CPNE1Q99829 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.3■□□□□ 0.2
CPNE1Q99829 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.3■□□□□ 0.2
CPNE1Q99829 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.3■□□□□ 0.2
CPNE1Q99829 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CPNE1Q99829 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.3■□□□□ 0.2
CPNE1Q99829 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CPNE1Q99829 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CPNE1Q99829 AL009183.1-201ENST00000603760 355 ntBASIC16.3■□□□□ 0.2
CPNE1Q99829 AL365330.1-201ENST00000607459 531 ntBASIC16.3■□□□□ 0.2
CPNE1Q99829 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.3■□□□□ 0.2
CPNE1Q99829 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.3■□□□□ 0.2
CPNE1Q99829 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.3■□□□□ 0.2
CPNE1Q99829 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE1Q99829 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE1Q99829 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE1Q99829 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE1Q99829 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE1Q99829 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
CPNE1Q99829 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE1Q99829 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE1Q99829 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CPNE1Q99829 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.3■□□□□ 0.2
CPNE1Q99829 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE1Q99829 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE1Q99829 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.3■□□□□ 0.2
CPNE1Q99829 AC103702.1-201ENST00000548801 2630 ntBASIC16.3■□□□□ 0.2
CPNE1Q99829 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CPNE1Q99829 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE1Q99829 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE1Q99829 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE1Q99829 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
CPNE1Q99829 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE1Q99829 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE1Q99829 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.29■□□□□ 0.2
CPNE1Q99829 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE1Q99829 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE1Q99829 TSPY26P-202ENST00000565928 3884 ntBASIC16.29■□□□□ 0.2
CPNE1Q99829 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE1Q99829 AC004870.1-201ENST00000315132 882 ntBASIC16.29■□□□□ 0.2
CPNE1Q99829 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE1Q99829 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE1Q99829 RHOQP3-201ENST00000437982 621 ntBASIC16.29■□□□□ 0.2
CPNE1Q99829 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CPNE1Q99829 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.29■□□□□ 0.2
CPNE1Q99829 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.29■□□□□ 0.2
CPNE1Q99829 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE1Q99829 UNC93B6-202ENST00000528242 690 ntBASIC16.29■□□□□ 0.2
CPNE1Q99829 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CPNE1Q99829 AC096734.2-201ENST00000562054 433 ntBASIC16.29■□□□□ 0.2
CPNE1Q99829 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE1Q99829 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE1Q99829 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CPNE1Q99829 AL049840.3-201ENST00000602669 611 ntBASIC16.29■□□□□ 0.2
CPNE1Q99829 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CPNE1Q99829 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CPNE1Q99829 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE1Q99829 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE1Q99829 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE1Q99829 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE1Q99829 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.29■□□□□ 0.2
CPNE1Q99829 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE1Q99829 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE1Q99829 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE1Q99829 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE1Q99829 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE1Q99829 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE1Q99829 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE1Q99829 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE1Q99829 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE1Q99829 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE1Q99829 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE1Q99829 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE1Q99829 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
CPNE1Q99829 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE1Q99829 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE1Q99829 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE1Q99829 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CPNE1Q99829 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE1Q99829 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE1Q99829 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE1Q99829 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE1Q99829 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CPNE1Q99829 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.28■□□□□ 0.2
CPNE1Q99829 FAAHP1-202ENST00000446499 1238 ntBASIC16.28■□□□□ 0.2
CPNE1Q99829 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms