Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ABCA3Q99758 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ABCA3Q99758 AC023310.1-201ENST00000554836 735 ntBASIC21.17■□□□□ 0.98
ABCA3Q99758 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC21.17■□□□□ 0.98
ABCA3Q99758 AL450472.2-201ENST00000603663 1156 ntBASIC21.17■□□□□ 0.98
ABCA3Q99758 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ABCA3Q99758 AC145423.3-201ENST00000615987 467 ntBASIC21.17■□□□□ 0.98
ABCA3Q99758 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC21.17■□□□□ 0.98
ABCA3Q99758 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
ABCA3Q99758 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.17■□□□□ 0.98
ABCA3Q99758 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ABCA3Q99758 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
ABCA3Q99758 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ABCA3Q99758 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.16■□□□□ 0.98
ABCA3Q99758 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ABCA3Q99758 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
ABCA3Q99758 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ABCA3Q99758 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC21.16■□□□□ 0.98
ABCA3Q99758 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
ABCA3Q99758 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ABCA3Q99758 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ABCA3Q99758 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC21.16■□□□□ 0.98
ABCA3Q99758 LDHBP1-201ENST00000455730 1119 ntBASIC21.16■□□□□ 0.98
ABCA3Q99758 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC21.16■□□□□ 0.98
ABCA3Q99758 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ABCA3Q99758 RN7SL574P-201ENST00000581512 297 ntBASIC21.16■□□□□ 0.98
ABCA3Q99758 AC006453.4-201ENST00000636949 1252 ntBASIC21.16■□□□□ 0.98
ABCA3Q99758 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ABCA3Q99758 AP001282.1-201ENST00000531301 1499 ntBASIC21.16■□□□□ 0.98
ABCA3Q99758 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ABCA3Q99758 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ABCA3Q99758 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ABCA3Q99758 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ABCA3Q99758 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ABCA3Q99758 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.16■□□□□ 0.98
ABCA3Q99758 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC21.16■□□□□ 0.98
ABCA3Q99758 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC21.16■□□□□ 0.98
ABCA3Q99758 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
ABCA3Q99758 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ABCA3Q99758 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ABCA3Q99758 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ABCA3Q99758 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ABCA3Q99758 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ABCA3Q99758 POU5F1P6-201ENST00000466990 990 ntBASIC21.15■□□□□ 0.98
ABCA3Q99758 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC21.15■□□□□ 0.98
ABCA3Q99758 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC21.15■□□□□ 0.98
ABCA3Q99758 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
ABCA3Q99758 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ABCA3Q99758 AC138649.2-201ENST00000615886 705 ntBASIC21.15■□□□□ 0.98
ABCA3Q99758 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ABCA3Q99758 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ABCA3Q99758 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ABCA3Q99758 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ABCA3Q99758 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.15■□□□□ 0.98
ABCA3Q99758 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ABCA3Q99758 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
ABCA3Q99758 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ABCA3Q99758 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ABCA3Q99758 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
ABCA3Q99758 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ABCA3Q99758 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ABCA3Q99758 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ABCA3Q99758 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ABCA3Q99758 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
ABCA3Q99758 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ABCA3Q99758 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
ABCA3Q99758 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ABCA3Q99758 AC007274.2-201ENST00000421675 662 ntBASIC21.15■□□□□ 0.98
ABCA3Q99758 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC21.15■□□□□ 0.98
ABCA3Q99758 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC21.15■□□□□ 0.98
ABCA3Q99758 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC21.15■□□□□ 0.98
ABCA3Q99758 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC21.15■□□□□ 0.98
ABCA3Q99758 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC21.15■□□□□ 0.98
ABCA3Q99758 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ABCA3Q99758 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC21.15■□□□□ 0.98
ABCA3Q99758 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ABCA3Q99758 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ABCA3Q99758 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
ABCA3Q99758 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ABCA3Q99758 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ABCA3Q99758 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ABCA3Q99758 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ABCA3Q99758 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
ABCA3Q99758 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ABCA3Q99758 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ABCA3Q99758 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ABCA3Q99758 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC21.14■□□□□ 0.97
ABCA3Q99758 AC253536.4-201ENST00000440539 267 ntBASIC21.14■□□□□ 0.97
ABCA3Q99758 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC21.14■□□□□ 0.97
ABCA3Q99758 PHKG1P2-201ENST00000457537 863 ntBASIC21.14■□□□□ 0.97
ABCA3Q99758 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ABCA3Q99758 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ABCA3Q99758 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC21.14■□□□□ 0.97
ABCA3Q99758 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC21.14■□□□□ 0.97
ABCA3Q99758 AC134407.2-201ENST00000625089 1978 ntBASIC21.14■□□□□ 0.97
ABCA3Q99758 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ABCA3Q99758 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ABCA3Q99758 AL023775.1-201ENST00000454907 1746 ntBASIC21.14■□□□□ 0.97
ABCA3Q99758 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ABCA3Q99758 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms