Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FGD4Q96M96 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FGD4Q96M96 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.36■□□□□ 0.53
FGD4Q96M96 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FGD4Q96M96 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.36■□□□□ 0.53
FGD4Q96M96 RN7SL752P-201ENST00000463779 287 ntBASIC18.36■□□□□ 0.53
FGD4Q96M96 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
FGD4Q96M96 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.36■□□□□ 0.53
FGD4Q96M96 TPRX2P-201ENST00000535362 881 ntBASIC18.36■□□□□ 0.53
FGD4Q96M96 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.36■□□□□ 0.53
FGD4Q96M96 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FGD4Q96M96 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.36■□□□□ 0.53
FGD4Q96M96 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FGD4Q96M96 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
FGD4Q96M96 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FGD4Q96M96 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FGD4Q96M96 AC099568.2-201ENST00000609194 695 ntBASIC18.36■□□□□ 0.53
FGD4Q96M96 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
FGD4Q96M96 MIR6069-201ENST00000620069 79 ntBASIC18.36■□□□□ 0.53
FGD4Q96M96 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.36■□□□□ 0.53
FGD4Q96M96 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FGD4Q96M96 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FGD4Q96M96 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.36■□□□□ 0.53
FGD4Q96M96 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FGD4Q96M96 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FGD4Q96M96 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
FGD4Q96M96 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.35■□□□□ 0.53
FGD4Q96M96 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.35■□□□□ 0.53
FGD4Q96M96 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.35■□□□□ 0.53
FGD4Q96M96 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
FGD4Q96M96 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FGD4Q96M96 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FGD4Q96M96 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
FGD4Q96M96 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.35■□□□□ 0.53
FGD4Q96M96 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
FGD4Q96M96 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.35■□□□□ 0.53
FGD4Q96M96 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.35■□□□□ 0.53
FGD4Q96M96 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.35■□□□□ 0.53
FGD4Q96M96 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
FGD4Q96M96 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FGD4Q96M96 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FGD4Q96M96 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
FGD4Q96M96 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
FGD4Q96M96 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
FGD4Q96M96 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FGD4Q96M96 HLA-A-202ENST00000376806 1854 ntBASIC18.35■□□□□ 0.53
FGD4Q96M96 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FGD4Q96M96 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FGD4Q96M96 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FGD4Q96M96 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FGD4Q96M96 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FGD4Q96M96 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FGD4Q96M96 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FGD4Q96M96 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FGD4Q96M96 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FGD4Q96M96 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.34■□□□□ 0.53
FGD4Q96M96 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FGD4Q96M96 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FGD4Q96M96 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
FGD4Q96M96 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.34■□□□□ 0.53
FGD4Q96M96 RN7SL837P-201ENST00000463010 287 ntBASIC18.34■□□□□ 0.53
FGD4Q96M96 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.34■□□□□ 0.53
FGD4Q96M96 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.34■□□□□ 0.53
FGD4Q96M96 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.34■□□□□ 0.53
FGD4Q96M96 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.34■□□□□ 0.53
FGD4Q96M96 IGHV3-71-201ENST00000523324 359 ntBASIC18.34■□□□□ 0.53
FGD4Q96M96 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.34■□□□□ 0.53
FGD4Q96M96 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
FGD4Q96M96 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
FGD4Q96M96 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
FGD4Q96M96 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
FGD4Q96M96 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.34■□□□□ 0.53
FGD4Q96M96 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FGD4Q96M96 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.34■□□□□ 0.53
FGD4Q96M96 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FGD4Q96M96 LINC01144-201ENST00000626198 1710 ntBASIC18.34■□□□□ 0.53
FGD4Q96M96 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FGD4Q96M96 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
FGD4Q96M96 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FGD4Q96M96 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
FGD4Q96M96 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FGD4Q96M96 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FGD4Q96M96 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.33■□□□□ 0.53
FGD4Q96M96 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.33■□□□□ 0.53
FGD4Q96M96 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FGD4Q96M96 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FGD4Q96M96 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.33■□□□□ 0.53
FGD4Q96M96 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.33■□□□□ 0.53
FGD4Q96M96 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
FGD4Q96M96 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
FGD4Q96M96 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.33■□□□□ 0.53
FGD4Q96M96 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FGD4Q96M96 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.33■□□□□ 0.53
FGD4Q96M96 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FGD4Q96M96 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FGD4Q96M96 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FGD4Q96M96 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FGD4Q96M96 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FGD4Q96M96 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.33■□□□□ 0.52
FGD4Q96M96 GPR53P-205ENST00000457298 1084 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms