Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 CROCCP1-201ENST00000426910 5675 ntBASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH19Q8TAB3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 AC046158.3-201ENST00000624947 2558 ntBASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 PMS2P2-201ENST00000425039 1128 ntBASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 AC027307.2-201ENST00000591252 911 ntBASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 AL365330.1-201ENST00000607459 531 ntBASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH19Q8TAB3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 KRT8P48-201ENST00000515599 1220 ntBASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 AC105233.2-201ENST00000523697 349 ntBASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 FAM86C2P-203ENST00000528684 1004 ntBASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 AF228730.5-201ENST00000530288 346 ntBASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 MIR4321-201ENST00000592276 80 ntBASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 AC008267.7-201ENST00000624570 1194 ntBASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDH19Q8TAB3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms