Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 SPDYE11-202ENST00000450699 704 ntBASIC14.29□□□□□ -0.12
CPEB3Q8NE35 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 PRYP6-201ENST00000514804 343 ntBASIC14.29□□□□□ -0.12
CPEB3Q8NE35 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 SPDYE9P-201ENST00000570642 692 ntBASIC14.29□□□□□ -0.12
CPEB3Q8NE35 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 SPDYE10P-202ENST00000612005 668 ntBASIC14.29□□□□□ -0.12
CPEB3Q8NE35 SPDYE8P-202ENST00000612377 668 ntBASIC14.29□□□□□ -0.12
CPEB3Q8NE35 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 AC006449.6-201ENST00000612330 2296 ntBASIC14.29□□□□□ -0.12
CPEB3Q8NE35 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 TIMM8BP1-201ENST00000452384 211 ntBASIC14.28□□□□□ -0.12
CPEB3Q8NE35 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 RN7SL589P-201ENST00000481268 310 ntBASIC14.28□□□□□ -0.12
CPEB3Q8NE35 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 AC079140.1-201ENST00000508039 487 ntBASIC14.28□□□□□ -0.12
CPEB3Q8NE35 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 GPALPP1-207ENST00000611650 899 ntBASIC14.28□□□□□ -0.12
CPEB3Q8NE35 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 DOC2GP-204ENST00000639052 2548 ntBASIC14.28□□□□□ -0.12
CPEB3Q8NE35 MTHFR-217ENST00000641820 1569 ntBASIC14.28□□□□□ -0.12
CPEB3Q8NE35 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CPEB3Q8NE35 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CPEB3Q8NE35 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CPEB3Q8NE35 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CPEB3Q8NE35 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.27□□□□□ -0.12
CPEB3Q8NE35 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.27□□□□□ -0.12
CPEB3Q8NE35 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CPEB3Q8NE35 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CPEB3Q8NE35 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CPEB3Q8NE35 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.27□□□□□ -0.12
CPEB3Q8NE35 U82695.1-201ENST00000635752 1889 ntBASIC14.27□□□□□ -0.12
CPEB3Q8NE35 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms