Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
HERC4Q5GLZ8 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
HERC4Q5GLZ8 AC093520.2-201ENST00000561830 333 ntBASIC18.23■□□□□ 0.51
HERC4Q5GLZ8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HERC4Q5GLZ8 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.23■□□□□ 0.51
HERC4Q5GLZ8 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HERC4Q5GLZ8 LINC00628-201ENST00000628516 1289 ntBASIC18.23■□□□□ 0.51
HERC4Q5GLZ8 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
HERC4Q5GLZ8 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HERC4Q5GLZ8 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.23■□□□□ 0.51
HERC4Q5GLZ8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.23■□□□□ 0.51
HERC4Q5GLZ8 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HERC4Q5GLZ8 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HERC4Q5GLZ8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HERC4Q5GLZ8 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HERC4Q5GLZ8 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HERC4Q5GLZ8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HERC4Q5GLZ8 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HERC4Q5GLZ8 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
HERC4Q5GLZ8 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HERC4Q5GLZ8 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
HERC4Q5GLZ8 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HERC4Q5GLZ8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.23■□□□□ 0.51
HERC4Q5GLZ8 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HERC4Q5GLZ8 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HERC4Q5GLZ8 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
HERC4Q5GLZ8 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 AC023141.5-201ENST00000458585 616 ntBASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 TERF1P3-201ENST00000505638 1227 ntBASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 AC092902.6-201ENST00000641783 218 ntBASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 AL596087.1-201ENST00000400979 1969 ntBASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.22■□□□□ 0.51
HERC4Q5GLZ8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 AL391005.1-201ENST00000623953 2435 ntBASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 AL671277.1-201ENST00000429656 993 ntBASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 INGX-202ENST00000489074 768 ntBASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 AC067863.1-201ENST00000494933 530 ntBASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 RARRES2P8-201ENST00000566335 367 ntBASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
HERC4Q5GLZ8 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms