Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.51■□□□□ 0.07
CLDN8P56748 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CLDN8P56748 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.51■□□□□ 0.07
CLDN8P56748 AC093909.1-201ENST00000504731 1122 ntBASIC15.51■□□□□ 0.07
CLDN8P56748 RNA5SP419-201ENST00000515908 135 ntBASIC15.51■□□□□ 0.07
CLDN8P56748 RNA5SP415-201ENST00000517246 115 ntBASIC15.51■□□□□ 0.07
CLDN8P56748 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CLDN8P56748 IGHV3-22-201ENST00000520721 359 ntBASIC15.51■□□□□ 0.07
CLDN8P56748 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CLDN8P56748 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CLDN8P56748 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.51■□□□□ 0.07
CLDN8P56748 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.51■□□□□ 0.07
CLDN8P56748 AC007064.4-201ENST00000637740 555 ntBASIC15.51■□□□□ 0.07
CLDN8P56748 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN8P56748 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.51■□□□□ 0.07
CLDN8P56748 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN8P56748 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.51■□□□□ 0.07
CLDN8P56748 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
CLDN8P56748 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CLDN8P56748 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.51■□□□□ 0.07
CLDN8P56748 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN8P56748 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN8P56748 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN8P56748 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN8P56748 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.51■□□□□ 0.07
CLDN8P56748 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CLDN8P56748 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN8P56748 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CLDN8P56748 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.51■□□□□ 0.07
CLDN8P56748 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
CLDN8P56748 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN8P56748 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN8P56748 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CLDN8P56748 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN8P56748 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN8P56748 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.5■□□□□ 0.07
CLDN8P56748 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN8P56748 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN8P56748 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CLDN8P56748 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CLDN8P56748 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN8P56748 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN8P56748 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN8P56748 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN8P56748 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN8P56748 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN8P56748 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.5■□□□□ 0.07
CLDN8P56748 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.5■□□□□ 0.07
CLDN8P56748 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.5■□□□□ 0.07
CLDN8P56748 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.5■□□□□ 0.07
CLDN8P56748 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.5■□□□□ 0.07
CLDN8P56748 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CLDN8P56748 AC023141.13-201ENST00000604991 943 ntBASIC15.5■□□□□ 0.07
CLDN8P56748 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.5■□□□□ 0.07
CLDN8P56748 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN8P56748 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.5■□□□□ 0.07
CLDN8P56748 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.5■□□□□ 0.07
CLDN8P56748 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN8P56748 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN8P56748 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN8P56748 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN8P56748 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.5■□□□□ 0.07
CLDN8P56748 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.5■□□□□ 0.07
CLDN8P56748 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN8P56748 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.5■□□□□ 0.07
CLDN8P56748 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.5■□□□□ 0.07
CLDN8P56748 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN8P56748 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN8P56748 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN8P56748 AC103702.1-201ENST00000548801 2630 ntBASIC15.49■□□□□ 0.07
CLDN8P56748 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
CLDN8P56748 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN8P56748 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
CLDN8P56748 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
CLDN8P56748 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CLDN8P56748 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN8P56748 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN8P56748 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN8P56748 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN8P56748 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN8P56748 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CLDN8P56748 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.49■□□□□ 0.07
CLDN8P56748 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN8P56748 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN8P56748 AC140658.5-201ENST00000438532 169 ntBASIC15.49■□□□□ 0.07
CLDN8P56748 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN8P56748 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.49■□□□□ 0.07
CLDN8P56748 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN8P56748 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CLDN8P56748 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CLDN8P56748 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.49■□□□□ 0.07
CLDN8P56748 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CLDN8P56748 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.49■□□□□ 0.07
CLDN8P56748 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.49■□□□□ 0.07
CLDN8P56748 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.49■□□□□ 0.07
CLDN8P56748 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.48■□□□□ 0.07
CLDN8P56748 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.48■□□□□ 0.07
CLDN8P56748 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.48■□□□□ 0.07
CLDN8P56748 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN8P56748 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms