Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SUMO3P55854 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SUMO3P55854 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SUMO3P55854 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
SUMO3P55854 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SUMO3P55854 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SUMO3P55854 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.73□□□□□ -0.05
SUMO3P55854 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.73□□□□□ -0.05
SUMO3P55854 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.73□□□□□ -0.05
SUMO3P55854 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.73□□□□□ -0.05
SUMO3P55854 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.73□□□□□ -0.05
SUMO3P55854 AL512356.2-201ENST00000546955 174 ntBASIC14.73□□□□□ -0.05
SUMO3P55854 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SUMO3P55854 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.73□□□□□ -0.05
SUMO3P55854 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.73□□□□□ -0.05
SUMO3P55854 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.73□□□□□ -0.05
SUMO3P55854 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SUMO3P55854 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.73□□□□□ -0.05
SUMO3P55854 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SUMO3P55854 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.73□□□□□ -0.05
SUMO3P55854 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.73□□□□□ -0.05
SUMO3P55854 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SUMO3P55854 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SUMO3P55854 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SUMO3P55854 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SUMO3P55854 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SUMO3P55854 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SUMO3P55854 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SUMO3P55854 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.73□□□□□ -0.05
SUMO3P55854 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.73□□□□□ -0.05
SUMO3P55854 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SUMO3P55854 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SUMO3P55854 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
SUMO3P55854 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SUMO3P55854 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SUMO3P55854 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
SUMO3P55854 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.72□□□□□ -0.05
SUMO3P55854 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
SUMO3P55854 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SUMO3P55854 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SUMO3P55854 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
SUMO3P55854 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SUMO3P55854 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.72□□□□□ -0.05
SUMO3P55854 RPS8P6-201ENST00000426177 609 ntBASIC14.72□□□□□ -0.05
SUMO3P55854 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.72□□□□□ -0.05
SUMO3P55854 SPDYE14P-201ENST00000442619 822 ntBASIC14.72□□□□□ -0.05
SUMO3P55854 AL139010.1-201ENST00000454878 894 ntBASIC14.72□□□□□ -0.05
SUMO3P55854 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.72□□□□□ -0.05
SUMO3P55854 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SUMO3P55854 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
SUMO3P55854 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
SUMO3P55854 AC027612.4-201ENST00000605371 583 ntBASIC14.72□□□□□ -0.05
SUMO3P55854 AL596442.2-201ENST00000610240 980 ntBASIC14.72□□□□□ -0.05
SUMO3P55854 AC018529.1-201ENST00000613063 361 ntBASIC14.72□□□□□ -0.05
SUMO3P55854 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SUMO3P55854 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SUMO3P55854 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SUMO3P55854 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.72□□□□□ -0.05
SUMO3P55854 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SUMO3P55854 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
SUMO3P55854 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
SUMO3P55854 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SUMO3P55854 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SUMO3P55854 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SUMO3P55854 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.72□□□□□ -0.05
SUMO3P55854 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SUMO3P55854 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.72□□□□□ -0.05
SUMO3P55854 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
SUMO3P55854 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SUMO3P55854 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SUMO3P55854 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SUMO3P55854 AC069224.1-201ENST00000566372 1715 ntBASIC14.72□□□□□ -0.05
SUMO3P55854 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SUMO3P55854 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
SUMO3P55854 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SUMO3P55854 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SUMO3P55854 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SUMO3P55854 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SUMO3P55854 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
SUMO3P55854 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SUMO3P55854 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SUMO3P55854 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SUMO3P55854 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.71□□□□□ -0.05
SUMO3P55854 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SUMO3P55854 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
SUMO3P55854 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
SUMO3P55854 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SUMO3P55854 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.71□□□□□ -0.05
SUMO3P55854 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.71□□□□□ -0.05
SUMO3P55854 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.71□□□□□ -0.05
SUMO3P55854 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SUMO3P55854 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SUMO3P55854 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
SUMO3P55854 AC026150.2-201ENST00000564693 1156 ntBASIC14.71□□□□□ -0.05
SUMO3P55854 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.71□□□□□ -0.05
SUMO3P55854 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.71□□□□□ -0.05
SUMO3P55854 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SUMO3P55854 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SUMO3P55854 AC139530.3-201ENST00000620344 690 ntBASIC14.71□□□□□ -0.05
SUMO3P55854 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms