Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKN2DP55273 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CDKN2DP55273 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKN2DP55273 AP003680.1-201ENST00000598970 3660 ntBASIC16.09■□□□□ 0.17
CDKN2DP55273 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKN2DP55273 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDKN2DP55273 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKN2DP55273 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDKN2DP55273 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKN2DP55273 AC112191.1-201ENST00000523689 701 ntBASIC16.09■□□□□ 0.17
CDKN2DP55273 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.09■□□□□ 0.17
CDKN2DP55273 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDKN2DP55273 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.09■□□□□ 0.17
CDKN2DP55273 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.09■□□□□ 0.17
CDKN2DP55273 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKN2DP55273 PMS2P7-201ENST00000506558 1336 ntBASIC16.09■□□□□ 0.17
CDKN2DP55273 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKN2DP55273 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKN2DP55273 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKN2DP55273 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKN2DP55273 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKN2DP55273 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKN2DP55273 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CDKN2DP55273 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CDKN2DP55273 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKN2DP55273 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDKN2DP55273 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.09■□□□□ 0.17
CDKN2DP55273 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.09■□□□□ 0.17
CDKN2DP55273 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.09■□□□□ 0.17
CDKN2DP55273 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDKN2DP55273 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
CDKN2DP55273 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDKN2DP55273 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.08■□□□□ 0.17
CDKN2DP55273 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDKN2DP55273 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.08■□□□□ 0.17
CDKN2DP55273 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.08■□□□□ 0.17
CDKN2DP55273 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
CDKN2DP55273 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.08■□□□□ 0.17
CDKN2DP55273 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDKN2DP55273 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.08■□□□□ 0.16
CDKN2DP55273 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CDKN2DP55273 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CDKN2DP55273 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDKN2DP55273 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CDKN2DP55273 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.08■□□□□ 0.16
CDKN2DP55273 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDKN2DP55273 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
CDKN2DP55273 MIR940-201ENST00000401276 94 ntBASIC16.08■□□□□ 0.16
CDKN2DP55273 HAUS4P1-201ENST00000406739 1145 ntBASIC16.08■□□□□ 0.16
CDKN2DP55273 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
CDKN2DP55273 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.08■□□□□ 0.16
CDKN2DP55273 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.08■□□□□ 0.16
CDKN2DP55273 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.08■□□□□ 0.16
CDKN2DP55273 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDKN2DP55273 RARRES2P8-201ENST00000566335 367 ntBASIC16.08■□□□□ 0.16
CDKN2DP55273 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.08■□□□□ 0.16
CDKN2DP55273 AL365330.1-201ENST00000607459 531 ntBASIC16.08■□□□□ 0.16
CDKN2DP55273 AC091812.2-201ENST00000619081 385 ntBASIC16.08■□□□□ 0.16
CDKN2DP55273 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.08■□□□□ 0.16
CDKN2DP55273 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.08■□□□□ 0.16
CDKN2DP55273 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.08■□□□□ 0.16
CDKN2DP55273 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.08■□□□□ 0.16
CDKN2DP55273 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.08■□□□□ 0.16
CDKN2DP55273 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CDKN2DP55273 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDKN2DP55273 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CDKN2DP55273 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDKN2DP55273 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDKN2DP55273 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CDKN2DP55273 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN2DP55273 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CDKN2DP55273 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
CDKN2DP55273 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN2DP55273 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN2DP55273 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.07■□□□□ 0.16
CDKN2DP55273 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CDKN2DP55273 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CDKN2DP55273 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CDKN2DP55273 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN2DP55273 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CDKN2DP55273 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN2DP55273 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN2DP55273 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.07■□□□□ 0.16
CDKN2DP55273 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CDKN2DP55273 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN2DP55273 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN2DP55273 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CDKN2DP55273 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.07■□□□□ 0.16
CDKN2DP55273 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN2DP55273 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN2DP55273 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.07■□□□□ 0.16
CDKN2DP55273 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.07■□□□□ 0.16
CDKN2DP55273 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN2DP55273 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.07■□□□□ 0.16
CDKN2DP55273 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN2DP55273 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.07■□□□□ 0.16
CDKN2DP55273 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN2DP55273 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.07■□□□□ 0.16
CDKN2DP55273 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN2DP55273 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms