Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDK7P50613 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDK7P50613 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDK7P50613 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDK7P50613 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.91■□□□□ 0.46
CDK7P50613 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDK7P50613 AC080080.1-201ENST00000625121 2420 ntBASIC17.91■□□□□ 0.46
CDK7P50613 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDK7P50613 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CDK7P50613 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.91■□□□□ 0.46
CDK7P50613 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDK7P50613 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CDK7P50613 AL391256.1-201ENST00000443260 1855 ntBASIC17.91■□□□□ 0.46
CDK7P50613 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CDK7P50613 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDK7P50613 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDK7P50613 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDK7P50613 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDK7P50613 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CDK7P50613 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDK7P50613 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.91■□□□□ 0.46
CDK7P50613 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.91■□□□□ 0.46
CDK7P50613 USP32P1-208ENST00000506594 1164 ntBASIC17.91■□□□□ 0.46
CDK7P50613 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.91■□□□□ 0.46
CDK7P50613 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.91■□□□□ 0.46
CDK7P50613 AC010319.3-201ENST00000597028 470 ntBASIC17.91■□□□□ 0.46
CDK7P50613 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.91■□□□□ 0.46
CDK7P50613 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
CDK7P50613 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDK7P50613 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDK7P50613 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.91■□□□□ 0.46
CDK7P50613 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CDK7P50613 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDK7P50613 GPAA1P2-202ENST00000606848 1787 ntBASIC17.91■□□□□ 0.46
CDK7P50613 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDK7P50613 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
CDK7P50613 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.91■□□□□ 0.46
CDK7P50613 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.91■□□□□ 0.46
CDK7P50613 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDK7P50613 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDK7P50613 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDK7P50613 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CDK7P50613 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.9■□□□□ 0.46
CDK7P50613 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
CDK7P50613 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDK7P50613 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CDK7P50613 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDK7P50613 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CDK7P50613 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CDK7P50613 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.9■□□□□ 0.46
CDK7P50613 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDK7P50613 CLK3P2-201ENST00000427566 1453 ntBASIC17.9■□□□□ 0.46
CDK7P50613 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDK7P50613 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDK7P50613 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDK7P50613 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.9■□□□□ 0.46
CDK7P50613 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.9■□□□□ 0.46
CDK7P50613 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CDK7P50613 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDK7P50613 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDK7P50613 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.9■□□□□ 0.46
CDK7P50613 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.9■□□□□ 0.46
CDK7P50613 ACTBP11-201ENST00000436287 1126 ntBASIC17.9■□□□□ 0.46
CDK7P50613 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.9■□□□□ 0.46
CDK7P50613 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.9■□□□□ 0.46
CDK7P50613 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CDK7P50613 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CDK7P50613 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDK7P50613 FAM8A2P-201ENST00000528813 1142 ntBASIC17.9■□□□□ 0.46
CDK7P50613 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDK7P50613 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.9■□□□□ 0.46
CDK7P50613 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.9■□□□□ 0.46
CDK7P50613 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.9■□□□□ 0.46
CDK7P50613 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CDK7P50613 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CDK7P50613 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDK7P50613 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.9■□□□□ 0.46
CDK7P50613 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CDK7P50613 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.9■□□□□ 0.46
CDK7P50613 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDK7P50613 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
CDK7P50613 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDK7P50613 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDK7P50613 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDK7P50613 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CDK7P50613 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CDK7P50613 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.89■□□□□ 0.46
CDK7P50613 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.89■□□□□ 0.45
CDK7P50613 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDK7P50613 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDK7P50613 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDK7P50613 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDK7P50613 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDK7P50613 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CDK7P50613 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
CDK7P50613 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.89■□□□□ 0.45
CDK7P50613 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.89■□□□□ 0.45
CDK7P50613 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.89■□□□□ 0.45
CDK7P50613 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.89■□□□□ 0.45
CDK7P50613 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms