Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CSNK1A1P48729 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1A1P48729 DNAJB3-201ENST00000446806 729 ntBASIC14.54□□□□□ -0.08
CSNK1A1P48729 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1A1P48729 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.54□□□□□ -0.08
CSNK1A1P48729 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.54□□□□□ -0.08
CSNK1A1P48729 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.54□□□□□ -0.08
CSNK1A1P48729 C20orf181-201ENST00000623918 480 ntBASIC14.54□□□□□ -0.08
CSNK1A1P48729 AC092902.6-201ENST00000641783 218 ntBASIC14.54□□□□□ -0.08
CSNK1A1P48729 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CSNK1A1P48729 AKAP8P1-201ENST00000434743 1349 ntBASIC14.54□□□□□ -0.08
CSNK1A1P48729 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1A1P48729 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1A1P48729 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1A1P48729 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.54□□□□□ -0.08
CSNK1A1P48729 AL592424.1-201ENST00000563624 1536 ntBASIC14.54□□□□□ -0.08
CSNK1A1P48729 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1A1P48729 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1A1P48729 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.54□□□□□ -0.08
CSNK1A1P48729 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1A1P48729 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1A1P48729 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1A1P48729 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.54□□□□□ -0.08
CSNK1A1P48729 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1A1P48729 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.54□□□□□ -0.08
CSNK1A1P48729 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CSNK1A1P48729 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1A1P48729 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1A1P48729 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1A1P48729 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1A1P48729 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CSNK1A1P48729 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1A1P48729 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.53□□□□□ -0.08
CSNK1A1P48729 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1A1P48729 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
CSNK1A1P48729 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1A1P48729 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.53□□□□□ -0.08
CSNK1A1P48729 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.53□□□□□ -0.08
CSNK1A1P48729 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CSNK1A1P48729 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1A1P48729 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1A1P48729 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.53□□□□□ -0.08
CSNK1A1P48729 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.53□□□□□ -0.08
CSNK1A1P48729 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.53□□□□□ -0.08
CSNK1A1P48729 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.53□□□□□ -0.08
CSNK1A1P48729 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1A1P48729 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1A1P48729 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CSNK1A1P48729 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CSNK1A1P48729 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1A1P48729 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1A1P48729 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1A1P48729 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1A1P48729 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1A1P48729 TFAMP1-201ENST00000412727 736 ntBASIC14.53□□□□□ -0.08
CSNK1A1P48729 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.53□□□□□ -0.08
CSNK1A1P48729 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
CSNK1A1P48729 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
CSNK1A1P48729 ACTG1P14-201ENST00000446382 1122 ntBASIC14.53□□□□□ -0.08
CSNK1A1P48729 RN7SL589P-201ENST00000481268 310 ntBASIC14.53□□□□□ -0.08
CSNK1A1P48729 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.53□□□□□ -0.08
CSNK1A1P48729 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1A1P48729 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CSNK1A1P48729 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CSNK1A1P48729 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
CSNK1A1P48729 AL135744.1-201ENST00000565098 629 ntBASIC14.53□□□□□ -0.08
CSNK1A1P48729 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.53□□□□□ -0.08
CSNK1A1P48729 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.53□□□□□ -0.08
CSNK1A1P48729 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.53□□□□□ -0.08
CSNK1A1P48729 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.53□□□□□ -0.08
CSNK1A1P48729 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.53□□□□□ -0.08
CSNK1A1P48729 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1A1P48729 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1A1P48729 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1A1P48729 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.53□□□□□ -0.08
CSNK1A1P48729 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1A1P48729 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1A1P48729 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CSNK1A1P48729 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1A1P48729 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.53□□□□□ -0.08
CSNK1A1P48729 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.53□□□□□ -0.08
CSNK1A1P48729 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1A1P48729 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.53□□□□□ -0.08
CSNK1A1P48729 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
CSNK1A1P48729 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1A1P48729 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1A1P48729 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1A1P48729 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.52□□□□□ -0.08
CSNK1A1P48729 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CSNK1A1P48729 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1A1P48729 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.52□□□□□ -0.08
CSNK1A1P48729 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1A1P48729 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CSNK1A1P48729 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1A1P48729 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1A1P48729 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.52□□□□□ -0.08
CSNK1A1P48729 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1A1P48729 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CSNK1A1P48729 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CSNK1A1P48729 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms