Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.98□□□□□ -0.01
SHC1P29353 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.98□□□□□ -0.01
SHC1P29353 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SHC1P29353 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.98□□□□□ -0.01
SHC1P29353 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHC1P29353 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHC1P29353 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
SHC1P29353 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHC1P29353 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHC1P29353 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SHC1P29353 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SHC1P29353 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SHC1P29353 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHC1P29353 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.98□□□□□ -0.01
SHC1P29353 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHC1P29353 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SHC1P29353 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHC1P29353 KRT18P13-201ENST00000400056 1290 ntBASIC14.98□□□□□ -0.01
SHC1P29353 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.98□□□□□ -0.01
SHC1P29353 AC092474.2-201ENST00000424288 719 ntBASIC14.98□□□□□ -0.01
SHC1P29353 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SHC1P29353 DNAJB3-201ENST00000446806 729 ntBASIC14.98□□□□□ -0.01
SHC1P29353 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.98□□□□□ -0.01
SHC1P29353 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.98□□□□□ -0.01
SHC1P29353 HLA-J-202ENST00000469281 1241 ntBASIC14.98□□□□□ -0.01
SHC1P29353 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.98□□□□□ -0.01
SHC1P29353 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.98□□□□□ -0.01
SHC1P29353 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.98□□□□□ -0.01
SHC1P29353 AC109635.5-201ENST00000533593 962 ntBASIC14.98□□□□□ -0.01
SHC1P29353 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.98□□□□□ -0.01
SHC1P29353 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.98□□□□□ -0.01
SHC1P29353 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.98□□□□□ -0.01
SHC1P29353 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.98□□□□□ -0.01
SHC1P29353 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SHC1P29353 AC055717.3-201ENST00000622967 595 ntBASIC14.98□□□□□ -0.01
SHC1P29353 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SHC1P29353 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
SHC1P29353 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHC1P29353 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHC1P29353 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHC1P29353 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.98□□□□□ -0.01
SHC1P29353 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SHC1P29353 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHC1P29353 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHC1P29353 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SHC1P29353 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHC1P29353 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHC1P29353 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.98□□□□□ -0.01
SHC1P29353 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHC1P29353 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SHC1P29353 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.98□□□□□ -0.01
SHC1P29353 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SHC1P29353 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHC1P29353 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SHC1P29353 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SHC1P29353 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHC1P29353 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHC1P29353 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SHC1P29353 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHC1P29353 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.97□□□□□ -0.01
SHC1P29353 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHC1P29353 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
SHC1P29353 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHC1P29353 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
SHC1P29353 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
SHC1P29353 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SHC1P29353 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHC1P29353 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHC1P29353 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHC1P29353 AC016027.1-202ENST00000607927 1699 ntBASIC14.97□□□□□ -0.01
SHC1P29353 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHC1P29353 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.97□□□□□ -0.01
SHC1P29353 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHC1P29353 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHC1P29353 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SHC1P29353 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.97□□□□□ -0.01
SHC1P29353 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.97□□□□□ -0.01
SHC1P29353 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SHC1P29353 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.97□□□□□ -0.01
SHC1P29353 AC005052.1-201ENST00000625181 2492 ntBASIC14.97□□□□□ -0.01
SHC1P29353 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHC1P29353 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SHC1P29353 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SHC1P29353 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.97□□□□□ -0.01
SHC1P29353 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.97□□□□□ -0.01
SHC1P29353 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SHC1P29353 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SHC1P29353 AC002056.1-201ENST00000395613 760 ntBASIC14.97□□□□□ -0.01
SHC1P29353 PMS2P4-201ENST00000412466 1052 ntBASIC14.97□□□□□ -0.01
SHC1P29353 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.97□□□□□ -0.01
SHC1P29353 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.97□□□□□ -0.01
SHC1P29353 AC112191.1-201ENST00000523689 701 ntBASIC14.97□□□□□ -0.01
SHC1P29353 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.97□□□□□ -0.01
SHC1P29353 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.97□□□□□ -0.01
SHC1P29353 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.97□□□□□ -0.01
SHC1P29353 MIR3909-201ENST00000579518 119 ntBASIC14.97□□□□□ -0.01
SHC1P29353 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHC1P29353 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHC1P29353 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHC1P29353 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms