Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
ABCD3P28288 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.02■□□□□ -0
ABCD3P28288 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
ABCD3P28288 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.02■□□□□ -0
ABCD3P28288 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ABCD3P28288 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.02■□□□□ -0
ABCD3P28288 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
ABCD3P28288 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.02■□□□□ -0
ABCD3P28288 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ABCD3P28288 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
ABCD3P28288 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.02■□□□□ -0
ABCD3P28288 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ABCD3P28288 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
ABCD3P28288 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
ABCD3P28288 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.02■□□□□ -0
ABCD3P28288 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.02■□□□□ -0
ABCD3P28288 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.02■□□□□ -0
ABCD3P28288 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.02■□□□□ -0
ABCD3P28288 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.02■□□□□ -0
ABCD3P28288 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
ABCD3P28288 AL512356.2-201ENST00000546955 174 ntBASIC15.02■□□□□ -0
ABCD3P28288 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.02■□□□□ -0
ABCD3P28288 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ABCD3P28288 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.02□□□□□ -0.01
ABCD3P28288 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.02□□□□□ -0.01
ABCD3P28288 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
ABCD3P28288 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.02□□□□□ -0.01
ABCD3P28288 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
ABCD3P28288 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.02□□□□□ -0.01
ABCD3P28288 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
ABCD3P28288 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.02□□□□□ -0.01
ABCD3P28288 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.02□□□□□ -0.01
ABCD3P28288 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ABCD3P28288 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.02□□□□□ -0.01
ABCD3P28288 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
ABCD3P28288 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
ABCD3P28288 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
ABCD3P28288 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.02□□□□□ -0.01
ABCD3P28288 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
ABCD3P28288 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
ABCD3P28288 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ABCD3P28288 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ABCD3P28288 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
ABCD3P28288 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ABCD3P28288 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.01□□□□□ -0.01
ABCD3P28288 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCD3P28288 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.01□□□□□ -0.01
ABCD3P28288 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.01□□□□□ -0.01
ABCD3P28288 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCD3P28288 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCD3P28288 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
ABCD3P28288 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
ABCD3P28288 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCD3P28288 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ABCD3P28288 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCD3P28288 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCD3P28288 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCD3P28288 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.01□□□□□ -0.01
ABCD3P28288 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCD3P28288 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCD3P28288 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCD3P28288 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCD3P28288 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCD3P28288 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCD3P28288 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
ABCD3P28288 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCD3P28288 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
ABCD3P28288 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCD3P28288 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCD3P28288 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
ABCD3P28288 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.01□□□□□ -0.01
ABCD3P28288 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.01□□□□□ -0.01
ABCD3P28288 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.01□□□□□ -0.01
ABCD3P28288 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.01□□□□□ -0.01
ABCD3P28288 AC025678.2-201ENST00000562061 970 ntBASIC15.01□□□□□ -0.01
ABCD3P28288 AC004449.1-201ENST00000564240 433 ntBASIC15.01□□□□□ -0.01
ABCD3P28288 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCD3P28288 AC061975.2-201ENST00000581722 295 ntBASIC15.01□□□□□ -0.01
ABCD3P28288 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.01□□□□□ -0.01
ABCD3P28288 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
ABCD3P28288 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCD3P28288 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.01□□□□□ -0.01
ABCD3P28288 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
ABCD3P28288 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.01□□□□□ -0.01
ABCD3P28288 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.01□□□□□ -0.01
ABCD3P28288 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCD3P28288 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ABCD3P28288 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ABCD3P28288 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCD3P28288 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCD3P28288 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.01□□□□□ -0.01
ABCD3P28288 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.01□□□□□ -0.01
ABCD3P28288 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ABCD3P28288 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCD3P28288 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCD3P28288 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ABCD3P28288 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
ABCD3P28288 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
ABCD3P28288 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
ABCD3P28288 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms