Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TPM3P06753 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.35■□□□□ 0.53
TPM3P06753 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TPM3P06753 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM3P06753 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM3P06753 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM3P06753 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.35■□□□□ 0.53
TPM3P06753 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM3P06753 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM3P06753 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM3P06753 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM3P06753 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM3P06753 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TPM3P06753 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM3P06753 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TPM3P06753 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.35■□□□□ 0.53
TPM3P06753 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
TPM3P06753 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TPM3P06753 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TPM3P06753 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TPM3P06753 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TPM3P06753 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TPM3P06753 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM3P06753 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM3P06753 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TPM3P06753 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TPM3P06753 TPSP2-201ENST00000561760 610 ntBASIC18.35■□□□□ 0.53
TPM3P06753 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.35■□□□□ 0.53
TPM3P06753 MPDU1-223ENST00000582151 728 ntBASIC18.35■□□□□ 0.53
TPM3P06753 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.35■□□□□ 0.53
TPM3P06753 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.35■□□□□ 0.53
TPM3P06753 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
TPM3P06753 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.35■□□□□ 0.53
TPM3P06753 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TPM3P06753 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM3P06753 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM3P06753 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM3P06753 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TPM3P06753 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TPM3P06753 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.35■□□□□ 0.53
TPM3P06753 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TPM3P06753 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM3P06753 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
TPM3P06753 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM3P06753 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC18.34■□□□□ 0.53
TPM3P06753 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.34■□□□□ 0.53
TPM3P06753 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TPM3P06753 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM3P06753 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.34■□□□□ 0.53
TPM3P06753 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM3P06753 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM3P06753 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TPM3P06753 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.34■□□□□ 0.53
TPM3P06753 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM3P06753 IGHV3-47-201ENST00000425060 335 ntBASIC18.34■□□□□ 0.53
TPM3P06753 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TPM3P06753 PRYP5-201ENST00000451909 266 ntBASIC18.34■□□□□ 0.53
TPM3P06753 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.34■□□□□ 0.53
TPM3P06753 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.34■□□□□ 0.53
TPM3P06753 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.34■□□□□ 0.53
TPM3P06753 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.34■□□□□ 0.53
TPM3P06753 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.34■□□□□ 0.53
TPM3P06753 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM3P06753 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TPM3P06753 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM3P06753 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TPM3P06753 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.34■□□□□ 0.53
TPM3P06753 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM3P06753 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TPM3P06753 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM3P06753 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TPM3P06753 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM3P06753 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TPM3P06753 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TPM3P06753 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TPM3P06753 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TPM3P06753 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TPM3P06753 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
TPM3P06753 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TPM3P06753 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TPM3P06753 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TPM3P06753 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.33■□□□□ 0.53
TPM3P06753 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TPM3P06753 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.33■□□□□ 0.53
TPM3P06753 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TPM3P06753 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.33■□□□□ 0.53
TPM3P06753 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM3P06753 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM3P06753 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.33■□□□□ 0.52
TPM3P06753 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
TPM3P06753 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM3P06753 AC026396.1-201ENST00000419388 421 ntBASIC18.33■□□□□ 0.52
TPM3P06753 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.33■□□□□ 0.52
TPM3P06753 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.33■□□□□ 0.52
TPM3P06753 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.33■□□□□ 0.52
TPM3P06753 AC091167.2-201ENST00000579581 588 ntBASIC18.33■□□□□ 0.52
TPM3P06753 AC066615.1-201ENST00000640911 628 ntBASIC18.33■□□□□ 0.52
TPM3P06753 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM3P06753 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC18.33■□□□□ 0.52
TPM3P06753 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms