Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 AP005901.3-202ENST00000581653 237 ntBASIC14.11□□□□□ -0.15
HLA-DQB1P01920 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 AL353135.1-201ENST00000606729 504 ntBASIC14.11□□□□□ -0.15
HLA-DQB1P01920 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.11□□□□□ -0.15
HLA-DQB1P01920 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DQB1P01920 FGD5P1-202ENST00000614866 2498 ntBASIC14.1□□□□□ -0.15
HLA-DQB1P01920 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 CHCHD2P8-201ENST00000429873 447 ntBASIC14.1□□□□□ -0.15
HLA-DQB1P01920 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 BX276092.5-203ENST00000456199 560 ntBASIC14.1□□□□□ -0.15
HLA-DQB1P01920 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 AL121672.3-201ENST00000608644 468 ntBASIC14.1□□□□□ -0.15
HLA-DQB1P01920 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DQB1P01920 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DQB1P01920 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQB1P01920 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQB1P01920 AC092127.1-201ENST00000567093 3455 ntBASIC14.09□□□□□ -0.15
HLA-DQB1P01920 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQB1P01920 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQB1P01920 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
HLA-DQB1P01920 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms