Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NDUFA3O95167 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NDUFA3O95167 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
NDUFA3O95167 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.06□□□□□ -0.32
NDUFA3O95167 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NDUFA3O95167 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA3O95167 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.05□□□□□ -0.32
NDUFA3O95167 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA3O95167 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA3O95167 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.05□□□□□ -0.32
NDUFA3O95167 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA3O95167 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.05□□□□□ -0.32
NDUFA3O95167 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA3O95167 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
NDUFA3O95167 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA3O95167 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.05□□□□□ -0.32
NDUFA3O95167 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.05□□□□□ -0.32
NDUFA3O95167 AL589702.1-201ENST00000641229 1509 ntBASIC13.05□□□□□ -0.32
NDUFA3O95167 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA3O95167 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA3O95167 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA3O95167 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA3O95167 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA3O95167 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA3O95167 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA3O95167 BX842568.4-201ENST00000421222 227 ntBASIC13.05□□□□□ -0.32
NDUFA3O95167 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA3O95167 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.05□□□□□ -0.32
NDUFA3O95167 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.05□□□□□ -0.32
NDUFA3O95167 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.05□□□□□ -0.32
NDUFA3O95167 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.05□□□□□ -0.32
NDUFA3O95167 AC243562.1-201ENST00000560672 389 ntBASIC13.05□□□□□ -0.32
NDUFA3O95167 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.05□□□□□ -0.32
NDUFA3O95167 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
NDUFA3O95167 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA3O95167 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.05□□□□□ -0.32
NDUFA3O95167 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.05□□□□□ -0.32
NDUFA3O95167 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.05□□□□□ -0.32
NDUFA3O95167 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.05□□□□□ -0.32
NDUFA3O95167 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
NDUFA3O95167 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
NDUFA3O95167 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
NDUFA3O95167 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NDUFA3O95167 AL365209.1-201ENST00000624418 6473 ntBASIC13.05□□□□□ -0.32
NDUFA3O95167 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NDUFA3O95167 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.05□□□□□ -0.32
NDUFA3O95167 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.05□□□□□ -0.32
NDUFA3O95167 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.05□□□□□ -0.32
NDUFA3O95167 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.05□□□□□ -0.32
NDUFA3O95167 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA3O95167 AC026691.1-201ENST00000602502 2017 ntBASIC13.05□□□□□ -0.32
NDUFA3O95167 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA3O95167 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
NDUFA3O95167 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.05□□□□□ -0.32
NDUFA3O95167 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
NDUFA3O95167 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA3O95167 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA3O95167 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
NDUFA3O95167 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA3O95167 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NDUFA3O95167 CICP6-201ENST00000457191 2729 ntBASIC13.04□□□□□ -0.32
NDUFA3O95167 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA3O95167 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA3O95167 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA3O95167 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.04□□□□□ -0.32
NDUFA3O95167 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA3O95167 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA3O95167 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.04□□□□□ -0.32
NDUFA3O95167 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA3O95167 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA3O95167 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.04□□□□□ -0.32
NDUFA3O95167 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA3O95167 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.04□□□□□ -0.32
NDUFA3O95167 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
NDUFA3O95167 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.04□□□□□ -0.32
NDUFA3O95167 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.04□□□□□ -0.32
NDUFA3O95167 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA3O95167 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA3O95167 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
NDUFA3O95167 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA3O95167 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NDUFA3O95167 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA3O95167 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
NDUFA3O95167 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA3O95167 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.04□□□□□ -0.32
NDUFA3O95167 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA3O95167 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA3O95167 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
NDUFA3O95167 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA3O95167 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.04□□□□□ -0.32
NDUFA3O95167 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.04□□□□□ -0.32
NDUFA3O95167 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.04□□□□□ -0.32
NDUFA3O95167 AC245100.5-201ENST00000452108 331 ntBASIC13.04□□□□□ -0.32
NDUFA3O95167 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA3O95167 KRT8P23-201ENST00000560090 1207 ntBASIC13.04□□□□□ -0.32
NDUFA3O95167 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.04□□□□□ -0.32
NDUFA3O95167 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA3O95167 AC027307.2-201ENST00000591252 911 ntBASIC13.04□□□□□ -0.32
NDUFA3O95167 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.04□□□□□ -0.32
NDUFA3O95167 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms