Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA12O60330 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.17■□□□□ 0.18
PCDHGA12O60330 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA12O60330 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA12O60330 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA12O60330 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA12O60330 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA12O60330 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA12O60330 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA12O60330 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA12O60330 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA12O60330 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA12O60330 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PCDHGA12O60330 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA12O60330 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA12O60330 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PCDHGA12O60330 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PCDHGA12O60330 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGA12O60330 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGA12O60330 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA12O60330 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA12O60330 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA12O60330 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA12O60330 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PCDHGA12O60330 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA12O60330 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA12O60330 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA12O60330 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PCDHGA12O60330 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA12O60330 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGA12O60330 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
PCDHGA12O60330 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA12O60330 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDHGA12O60330 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PCDHGA12O60330 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.16■□□□□ 0.18
PCDHGA12O60330 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDHGA12O60330 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGA12O60330 AL844908.2-201ENST00000609461 460 ntBASIC16.16■□□□□ 0.18
PCDHGA12O60330 AC008738.7-201ENST00000609744 511 ntBASIC16.16■□□□□ 0.18
PCDHGA12O60330 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.16■□□□□ 0.18
PCDHGA12O60330 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA12O60330 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA12O60330 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA12O60330 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PCDHGA12O60330 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PCDHGA12O60330 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA12O60330 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGA12O60330 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA12O60330 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA12O60330 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA12O60330 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PCDHGA12O60330 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA12O60330 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA12O60330 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGA12O60330 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA12O60330 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA12O60330 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PCDHGA12O60330 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PCDHGA12O60330 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA12O60330 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA12O60330 AC098614.1-201ENST00000368528 745 ntBASIC16.15■□□□□ 0.18
PCDHGA12O60330 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
PCDHGA12O60330 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGA12O60330 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGA12O60330 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGA12O60330 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA12O60330 AC098859.1-201ENST00000502915 1238 ntBASIC16.15■□□□□ 0.18
PCDHGA12O60330 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGA12O60330 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGA12O60330 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDHGA12O60330 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDHGA12O60330 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGA12O60330 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGA12O60330 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDHGA12O60330 RN7SL828P-201ENST00000607615 303 ntBASIC16.15■□□□□ 0.18
PCDHGA12O60330 AL589739.1-201ENST00000607720 493 ntBASIC16.15■□□□□ 0.18
PCDHGA12O60330 AC005915.1-201ENST00000624912 2018 ntBASIC16.15■□□□□ 0.18
PCDHGA12O60330 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGA12O60330 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGA12O60330 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGA12O60330 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA12O60330 LINC02199-201ENST00000506655 2702 ntBASIC16.15■□□□□ 0.18
PCDHGA12O60330 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
PCDHGA12O60330 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA12O60330 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PCDHGA12O60330 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.14■□□□□ 0.18
PCDHGA12O60330 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.14■□□□□ 0.18
PCDHGA12O60330 AL603756.1-201ENST00000606511 2163 ntBASIC16.14■□□□□ 0.17
PCDHGA12O60330 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA12O60330 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PCDHGA12O60330 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA12O60330 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGA12O60330 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PCDHGA12O60330 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA12O60330 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA12O60330 AC008741.2-201ENST00000612792 3115 ntBASIC16.14■□□□□ 0.17
PCDHGA12O60330 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA12O60330 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA12O60330 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA12O60330 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms