Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC28A1O00337 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.72■□□□□ 0.11
SLC28A1O00337 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
SLC28A1O00337 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.72■□□□□ 0.11
SLC28A1O00337 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.72■□□□□ 0.11
SLC28A1O00337 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SLC28A1O00337 HAUS4P1-201ENST00000406739 1145 ntBASIC15.72■□□□□ 0.11
SLC28A1O00337 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.72■□□□□ 0.11
SLC28A1O00337 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.72■□□□□ 0.11
SLC28A1O00337 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.72■□□□□ 0.11
SLC28A1O00337 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC28A1O00337 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.72■□□□□ 0.11
SLC28A1O00337 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.72■□□□□ 0.11
SLC28A1O00337 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC28A1O00337 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC28A1O00337 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 AL009183.1-201ENST00000603760 355 ntBASIC15.72■□□□□ 0.11
SLC28A1O00337 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.72■□□□□ 0.11
SLC28A1O00337 AC007064.4-201ENST00000637740 555 ntBASIC15.72■□□□□ 0.11
SLC28A1O00337 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC28A1O00337 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SLC28A1O00337 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC28A1O00337 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.72■□□□□ 0.11
SLC28A1O00337 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SLC28A1O00337 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC28A1O00337 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC28A1O00337 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC28A1O00337 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC28A1O00337 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC28A1O00337 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC28A1O00337 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC28A1O00337 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC28A1O00337 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC28A1O00337 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC28A1O00337 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC28A1O00337 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC28A1O00337 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SLC28A1O00337 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC28A1O00337 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC28A1O00337 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC28A1O00337 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC28A1O00337 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC28A1O00337 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.71■□□□□ 0.11
SLC28A1O00337 AC092474.2-201ENST00000424288 719 ntBASIC15.71■□□□□ 0.11
SLC28A1O00337 RHOQP3-201ENST00000437982 621 ntBASIC15.71■□□□□ 0.11
SLC28A1O00337 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC28A1O00337 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
SLC28A1O00337 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC28A1O00337 AL365330.1-201ENST00000607459 531 ntBASIC15.71■□□□□ 0.11
SLC28A1O00337 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.71■□□□□ 0.11
SLC28A1O00337 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC28A1O00337 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC28A1O00337 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC28A1O00337 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
SLC28A1O00337 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC28A1O00337 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC28A1O00337 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC28A1O00337 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
SLC28A1O00337 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.71■□□□□ 0.1
SLC28A1O00337 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.71■□□□□ 0.1
SLC28A1O00337 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SLC28A1O00337 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC28A1O00337 AC008677.1-201ENST00000519230 1561 ntBASIC15.7■□□□□ 0.1
SLC28A1O00337 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC28A1O00337 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SLC28A1O00337 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC28A1O00337 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC28A1O00337 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.7■□□□□ 0.1
SLC28A1O00337 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC28A1O00337 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC28A1O00337 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms