Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.02■□□□□ 0.15
CDC7O00311 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.02■□□□□ 0.15
CDC7O00311 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
CDC7O00311 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CDC7O00311 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDC7O00311 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDC7O00311 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CDC7O00311 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDC7O00311 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDC7O00311 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDC7O00311 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CDC7O00311 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDC7O00311 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDC7O00311 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDC7O00311 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDC7O00311 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDC7O00311 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDC7O00311 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDC7O00311 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDC7O00311 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDC7O00311 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.01■□□□□ 0.15
CDC7O00311 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDC7O00311 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CDC7O00311 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDC7O00311 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.01■□□□□ 0.15
CDC7O00311 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CDC7O00311 AL591424.1-201ENST00000442569 1213 ntBASIC16.01■□□□□ 0.15
CDC7O00311 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
CDC7O00311 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.01■□□□□ 0.15
CDC7O00311 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.01■□□□□ 0.15
CDC7O00311 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.01■□□□□ 0.15
CDC7O00311 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.01■□□□□ 0.15
CDC7O00311 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.01■□□□□ 0.15
CDC7O00311 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.01■□□□□ 0.15
CDC7O00311 AC099522.2-201ENST00000607001 744 ntBASIC16.01■□□□□ 0.15
CDC7O00311 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CDC7O00311 FAM197Y3-203ENST00000618346 717 ntBASIC16.01■□□□□ 0.15
CDC7O00311 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDC7O00311 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDC7O00311 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.01■□□□□ 0.15
CDC7O00311 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDC7O00311 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDC7O00311 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.01■□□□□ 0.15
CDC7O00311 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDC7O00311 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
CDC7O00311 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CDC7O00311 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDC7O00311 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDC7O00311 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CDC7O00311 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CDC7O00311 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.01■□□□□ 0.15
CDC7O00311 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDC7O00311 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16■□□□□ 0.15
CDC7O00311 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CDC7O00311 AP003680.1-201ENST00000598970 3660 ntBASIC16■□□□□ 0.15
CDC7O00311 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CDC7O00311 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16■□□□□ 0.15
CDC7O00311 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CDC7O00311 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CDC7O00311 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CDC7O00311 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CDC7O00311 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CDC7O00311 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDC7O00311 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CDC7O00311 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDC7O00311 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDC7O00311 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDC7O00311 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
CDC7O00311 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDC7O00311 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDC7O00311 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16■□□□□ 0.15
CDC7O00311 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16■□□□□ 0.15
CDC7O00311 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDC7O00311 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDC7O00311 AC023274.1-201ENST00000418278 595 ntBASIC16■□□□□ 0.15
CDC7O00311 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDC7O00311 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CDC7O00311 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16■□□□□ 0.15
CDC7O00311 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16■□□□□ 0.15
CDC7O00311 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CDC7O00311 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16■□□□□ 0.15
CDC7O00311 AL161645.1-201ENST00000622716 1255 ntBASIC16■□□□□ 0.15
CDC7O00311 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16■□□□□ 0.15
CDC7O00311 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16■□□□□ 0.15
CDC7O00311 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CDC7O00311 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16■□□□□ 0.15
CDC7O00311 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CDC7O00311 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CDC7O00311 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDC7O00311 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CDC7O00311 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDC7O00311 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CDC7O00311 AP005117.1-202ENST00000581724 1908 ntBASIC16■□□□□ 0.15
CDC7O00311 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
CDC7O00311 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
CDC7O00311 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
CDC7O00311 AL589702.1-201ENST00000641229 1509 ntBASIC15.99■□□□□ 0.15
CDC7O00311 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDC7O00311 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDC7O00311 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms