Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SSC5DA1L4H1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSC5DA1L4H1 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.65■□□□□ 0.58
SSC5DA1L4H1 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSC5DA1L4H1 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSC5DA1L4H1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSC5DA1L4H1 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
SSC5DA1L4H1 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.65■□□□□ 0.58
SSC5DA1L4H1 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.65■□□□□ 0.58
SSC5DA1L4H1 AC022137.2-201ENST00000503482 481 ntBASIC18.65■□□□□ 0.58
SSC5DA1L4H1 PARP8-218ENST00000513738 596 ntTSL 4 BASIC18.65■□□□□ 0.58
SSC5DA1L4H1 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.65■□□□□ 0.58
SSC5DA1L4H1 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC18.65■□□□□ 0.58
SSC5DA1L4H1 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC18.65■□□□□ 0.58
SSC5DA1L4H1 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSC5DA1L4H1 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.65■□□□□ 0.58
SSC5DA1L4H1 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.65■□□□□ 0.58
SSC5DA1L4H1 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSC5DA1L4H1 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.65■□□□□ 0.58
SSC5DA1L4H1 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.65■□□□□ 0.58
SSC5DA1L4H1 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSC5DA1L4H1 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.65■□□□□ 0.58
SSC5DA1L4H1 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.65■□□□□ 0.58
SSC5DA1L4H1 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSC5DA1L4H1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SSC5DA1L4H1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
SSC5DA1L4H1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSC5DA1L4H1 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.65■□□□□ 0.58
SSC5DA1L4H1 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSC5DA1L4H1 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.65■□□□□ 0.58
SSC5DA1L4H1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.65■□□□□ 0.58
SSC5DA1L4H1 UBALD1-205ENST00000590891 2641 ntBASIC18.65■□□□□ 0.58
SSC5DA1L4H1 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SSC5DA1L4H1 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.64■□□□□ 0.58
SSC5DA1L4H1 CNN2P8-201ENST00000421872 913 ntBASIC18.64■□□□□ 0.58
SSC5DA1L4H1 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC18.64■□□□□ 0.58
SSC5DA1L4H1 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.64■□□□□ 0.58
SSC5DA1L4H1 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.64■□□□□ 0.58
SSC5DA1L4H1 RNA5SP423-201ENST00000517127 109 ntBASIC18.64■□□□□ 0.58
SSC5DA1L4H1 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.64■□□□□ 0.58
SSC5DA1L4H1 AC079316.1-201ENST00000548397 411 ntBASIC18.64■□□□□ 0.58
SSC5DA1L4H1 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SSC5DA1L4H1 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
SSC5DA1L4H1 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
SSC5DA1L4H1 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.64■□□□□ 0.58
SSC5DA1L4H1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 AL645608.8-201ENST00000606034 2086 ntBASIC18.64■□□□□ 0.57
SSC5DA1L4H1 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSC5DA1L4H1 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.63■□□□□ 0.57
SSC5DA1L4H1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SSC5DA1L4H1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSC5DA1L4H1 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSC5DA1L4H1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.63■□□□□ 0.57
SSC5DA1L4H1 AL121723.1-201ENST00000445194 1519 ntBASIC18.63■□□□□ 0.57
SSC5DA1L4H1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSC5DA1L4H1 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSC5DA1L4H1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSC5DA1L4H1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSC5DA1L4H1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSC5DA1L4H1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.63■□□□□ 0.57
SSC5DA1L4H1 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSC5DA1L4H1 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSC5DA1L4H1 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SSC5DA1L4H1 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SSC5DA1L4H1 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSC5DA1L4H1 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSC5DA1L4H1 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms