Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 AC104581.4-201ENST00000623126 3052 ntBASIC14.23□□□□□ -0.13
SHISA3A0PJX4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 PTCHD3P3-201ENST00000403073 906 ntBASIC14.23□□□□□ -0.13
SHISA3A0PJX4 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.23□□□□□ -0.13
SHISA3A0PJX4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 AL022326.1-202ENST00000641533 845 ntBASIC14.23□□□□□ -0.13
SHISA3A0PJX4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.23□□□□□ -0.13
SHISA3A0PJX4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 TSSC2-201ENST00000450217 709 ntBASIC14.22□□□□□ -0.13
SHISA3A0PJX4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 AC074051.2-201ENST00000565115 352 ntBASIC14.22□□□□□ -0.13
SHISA3A0PJX4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 MIR5100-201ENST00000579544 119 ntBASIC14.22□□□□□ -0.13
SHISA3A0PJX4 NKAPP1-205ENST00000585790 367 ntBASIC14.22□□□□□ -0.13
SHISA3A0PJX4 AP002414.4-201ENST00000589764 1148 ntBASIC14.22□□□□□ -0.13
SHISA3A0PJX4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 AF228730.7-201ENST00000641842 219 ntBASIC14.22□□□□□ -0.13
SHISA3A0PJX4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.22□□□□□ -0.13
SHISA3A0PJX4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHISA3A0PJX4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
SHISA3A0PJX4 PI4KAP1-204ENST00000612579 1703 ntBASIC14.21□□□□□ -0.13
SHISA3A0PJX4 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHISA3A0PJX4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.21□□□□□ -0.13
SHISA3A0PJX4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
SHISA3A0PJX4 AC005332.1-201ENST00000577698 1310 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms