Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 KLF2P4-201ENST00000451959 1225 ntBASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 MIR5189-201ENST00000577370 114 ntBASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 MIR1908-201ENST00000410394 80 ntBASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 RN7SL219P-201ENST00000582872 296 ntBASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HCFC2Q9Y5Z7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 AL133338.1-201ENST00000565695 1517 ntBASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 ACTG1P3-201ENST00000431775 1114 ntBASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 RPL13P2-201ENST00000440687 659 ntBASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 TDH-203ENST00000531764 1110 ntBASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 AL022328.1-201ENST00000610050 478 ntBASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 GPR182-203ENST00000622922 591 ntBASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HCFC2Q9Y5Z7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms