Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 GPAA1P2-202ENST00000606848 1787 ntBASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 AP002414.3-201ENST00000589352 1468 ntBASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 RPS15P9-201ENST00000494093 319 ntBASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 MIR4492-201ENST00000581627 80 ntBASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 AL049840.3-201ENST00000602669 611 ntBASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 AC116407.3-201ENST00000623905 1129 ntBASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 AF228730.7-201ENST00000641842 219 ntBASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 AC131009.4-201ENST00000624048 1740 ntBASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 AL596257.1-201ENST00000641463 2694 ntBASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 AC011270.2-201ENST00000624293 2550 ntBASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 PTCHD3P3-201ENST00000403073 906 ntBASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 AC098831.1-202ENST00000438821 336 ntBASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 PAWRP1-201ENST00000451083 565 ntBASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 AC008667.4-201ENST00000607370 168 ntBASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 AP001350.2-201ENST00000625104 1094 ntBASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.63□□□□□ -0.23
LIN7CQ9NUP9 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.62□□□□□ -0.23
LIN7CQ9NUP9 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms