Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 FTLP10-202ENST00000505798 471 ntBASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 AC079316.1-201ENST00000548397 411 ntBASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 MIR3619-201ENST00000579667 83 ntBASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 AC020914.3-201ENST00000594712 304 ntBASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNTNAP3Q9BZ76 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CNTNAP3Q9BZ76 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CNTNAP3Q9BZ76 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.52■□□□□ 0.07
CNTNAP3Q9BZ76 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CNTNAP3Q9BZ76 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNTNAP3Q9BZ76 AL353732.1-201ENST00000569618 1459 ntBASIC15.52■□□□□ 0.07
CNTNAP3Q9BZ76 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 AC026954.1-201ENST00000429771 1293 ntBASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 MAGEA5-201ENST00000446757 942 ntBASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 BX284668.4-201ENST00000453917 508 ntBASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 DUX4L45-201ENST00000566406 1057 ntBASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 KRT8P22-201ENST00000562317 1415 ntBASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNTNAP3Q9BZ76 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 AC093010.1-201ENST00000473625 1624 ntBASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 FAM220BP-201ENST00000377689 816 ntBASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 AC104784.1-201ENST00000473096 294 ntBASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CNTNAP3Q9BZ76 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms