Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 AC123567.1-201ENST00000548294 1261 ntBASIC14.32□□□□□ -0.12
PCNX1Q96RV3 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 AC024267.1-201ENST00000582320 895 ntBASIC14.32□□□□□ -0.12
PCNX1Q96RV3 TMEM261P1-201ENST00000604899 340 ntBASIC14.32□□□□□ -0.12
PCNX1Q96RV3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 OR6D1P-202ENST00000641007 5290 ntBASIC14.32□□□□□ -0.12
PCNX1Q96RV3 AL512652.2-201ENST00000625156 1716 ntBASIC14.32□□□□□ -0.12
PCNX1Q96RV3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 MEP1AP4-201ENST00000423244 1087 ntBASIC14.31□□□□□ -0.12
PCNX1Q96RV3 RPL7P3-201ENST00000441388 714 ntBASIC14.31□□□□□ -0.12
PCNX1Q96RV3 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 AC104989.1-201ENST00000519711 778 ntBASIC14.31□□□□□ -0.12
PCNX1Q96RV3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 RNF216P1-203ENST00000404404 2427 ntBASIC14.31□□□□□ -0.12
PCNX1Q96RV3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.31□□□□□ -0.12
PCNX1Q96RV3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCNX1Q96RV3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCNX1Q96RV3 AL136982.4-201ENST00000437689 1740 ntBASIC14.3□□□□□ -0.12
PCNX1Q96RV3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCNX1Q96RV3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCNX1Q96RV3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCNX1Q96RV3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.3□□□□□ -0.12
PCNX1Q96RV3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCNX1Q96RV3 GPAA1P2-202ENST00000606848 1787 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms